EST details — SGN-E377362

Search information 
Request: 377362Match: SGN-E377362
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175558Clone name: TUS-21-K12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175558 is on microarray TOM1 spot ID 1-1-5.3.13.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15487 [cLED-13-B13] Trace: SGN-T51861 EST: SGN-E236583 Direction: 5' Facility: TIGR
Clone: SGN-C175558 [TUS-21-K12] Trace: SGN-T190411 EST: SGN-E377361 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377362Length: 690 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377362 [] (trimmed) TGAAAACCACTGAGTTCTGGACATCTCATGAGTGCTTACTTTTGCCCTATGAACAGTCACTAACACGCCGGGATTCAACTTCTGGCCTTCACTAT
GATTGCTCTGCTCATTTCCTTTGGGTTGGAGAGAGAACCAGGCAGTTGGATGGTGCCCATGTTGAGTTCTTGAGAGGAATTGCCAACCCTCTCGG
TATTAAGGTGAGTGACAAGATGGACCCAAGTGCATTGGTCAAGCTCATTGAGATTTTGAACCCACAAAACAAAGCTGGAAGGATTACAATAATTA
CCAGAATGGGAGCAGAAAACATGAGGGTTAAGCTTCCTCATCTTATCAGGGCAGTCCGAAGAGCAGGACAAATTGTGACTTGGGTATCTGATCCT
ATGCACGGAAATACCATCAAAGCTCCATGCGGTCTAAAAACTCGACCTTTTGATTCCATCAGGGCTGAGGTAAGAGCATTCTTTGATGTTCATGA
TCAAGAAGGAAGCCACCCAGGAGGAGTTCATCTTGAGATGACAGGCCAAAACGTCACAGAGTGCATTGGTGGATCACGAACTGTGACCTTTGATG
ATCTGAGCTCACGTTACCACACTCACTGTGATCCTAGGCTCAATGCATCTCAATCCCTTGAGCTCTCATTCATTATCGCAGAACGTTTGAGGAAA
AGGAGGCTCGGATCGCAAAGCACAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377362] SGN-U566921 Tomato 200607 Build 2 132 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190412 [Download][View] Facility Assigned ID: FA0AAD9BF06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5