EST details — SGN-E377316

Search information 
Request: 377316Match: SGN-E377316
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174918Clone name: TUS-19-P20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174918 is on microarray TOM1 spot ID 1-1-5.4.15.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23746 [cLED-6-D7] Trace: SGN-T49972 EST: SGN-E232986 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377316Length: 744 bp (912 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377316 [] (trimmed) AAGTTAAAAAAAACTATTTTGAGTATTGCCAAACAGTTAAATAAGTCAAAAACCAGCTTTTAAGCTGAGCCAAACAGGCTCTAAGTATCTCTGCT
TAAAATAACTGTGACATCTTTGCTTTTCTGGGAGTTTGAAACCCAAAATCAGGTATCCTCAGTCCTTTATCTGCCAATTGATGCTAGTCAAGAAG
ACTTCATGAATTTTCAGCATCCATCCGTTCAATCACACGACGTGCTTCTTCCTCTGTACCAGGGACGACATTCCTAACTCGTGCACCATTTTTCA
GTGAATCTTGTTGGACAGTGAAAGTGAAATAGAAATTGTTTGAAACCTCGCTAGACCGCAACTCAGGTCTCATGACATGAGCTACCACTTCTACA
TTGATCAGAGGCTTAGATAAATTCTCTAGTTCTGTGTACAAAACACATGATTTGAGGCGGAGGAAATTTCCAACATCAACAGGTTTCAAGAAATC
AACATGATCAACTTCCACAAAGCAAGGTGCACTGCCTGCAAATGCATAAGCTGTTGCATAAGCCAGCTCAAAAGCTCTCCGCATTAAGAATCCTC
CAAAGATTCGACCATGGATATTTCGCTGCTGTGGCTGGCAAATCAAAGAGTTCTGAAGACATGTATCTTTTATTAAAATGCTGTCTCTATCTGCT
AAAGCAGGCATATCGCAAAAGATTCGGCTCTCAGCCAACAATTCGTTTAGCCTATTCACTTCCTCACCCTGAATTTCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377316] SGN-U580300 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189670 [Download][View] Facility Assigned ID: FA0AAD7DH10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0075 Quality Trim Threshold: 14.5