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EST details — SGN-E377237

Search information 
Request: 377237Match: SGN-E377237
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174864Clone name: TUS-19-N14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174864 is on microarray TOM1 spot ID 1-1-3.2.15.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23685 [cLED-6-B15] Trace: SGN-T50060 EST: SGN-E233074 Direction: 5' Facility: TIGR
Clone: SGN-C174864 [TUS-19-N14] Trace: SGN-T189592 EST: SGN-E377238 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377237Length: 549 bp (907 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377237 [] (trimmed) CATTTGATTCGAACATTATTATTATTATTTCACTTGAAGATTCAACACAACACAAACAAAAAACAATACAACAAAACAAATGCAACCACGAGCTG
ATCGCGCAGATGATAAGCATCTCGTGTGAGATCCTACTTTAAAAAAAAAATTACAACCACATTACATAACAATTAAATATCCGCTAAGCACTATT
TACATAGCGACATACTTTTCTAATTTCACCTTGATCTCCAATAAGTGGATTATTTTCAGACAAAATAAGCATAGCCCTAGCAAATTGTTGATGAA
AATAATTATTATCATTAGCCATTTTCACCACAAATGGTGAAGTATTTGGATCACTAACCAATTCTTGATCCACAATTAATAACCCTTTTTTGTTC
AATATATTCTTGTAGTACATATTGTCTAAAATCATTGTAGTTTCGCGATCAAATCTTGAGTATAAAACAGCCTCCGGGTCAGGGTTTGGTGACGG
GCATCGACCCTTAAGGGACTTTGCGTAGTCGGGATCGATAGTGGGGTCCACGGTTGGGTAAAGCCTGTGGACTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377237] SGN-U579987 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189591 [Download][View] Facility Assigned ID: FA0AAD7DG07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5