EST details — SGN-E377210

Search information 
Request: 377210Match: SGN-E377210
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174718Clone name: TUS-19-H12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174718 is on microarray TOM1 spot ID 1-1-5.4.15.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23467 [cLED-5-H22] Trace: SGN-T49709 EST: SGN-E231093 Direction: 5' Facility: TIGR
Clone: SGN-C174718 [TUS-19-H12] Trace: SGN-T189563 EST: SGN-E377209 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E377210Length: 597 bp (932 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377210 [] (trimmed) GGAATCTGGAAAAGTACTTTCCATTAAGATTCATAAGGATGAAGAAACTGGTAAGATATTGAATTTGGTCTTTGTATGGGCTGAATATGGAACAA
AATTAACGGTCGACGTGCCTGTTGTGTTCAAAGGGGAGCACGAGTGCCCTGTTCTCATGAAAGGTGGTTATCTAAACAAGATTAAACCTTTCCTA
ACGTTGTTGTGCCCAACGCAGAGTATACCTTATAATAATTGAGGTGGACATAAGTCAGCTAGATGTTGAAGACAAAGTGTCCCTGCATGATATCG
ATGTTCATCCAACTTGTAAGCTCTTAATCAAGAATGAAACCATCCCTGTTTGTCAGGTTAACGCAACGCCAGTTGATAGCTAATTTTGTCGATGC
TATTTTTTAACTGGCAGATGCATCTTAAGTCTCCATTAGTTCAACATTGTCTGTTCTAATTTTGACCTGGTTTCGTACTGGCGTATATGGACACG
GTCAAAAGACATTAGAAACTTTTGCTATACTGTAGTAGTAAAATTGCTATTTTGGGAATTGTTCTAGAATAATAAACTTGTGCATTAATGAGTAA
ATTGGAAATGCAACTGCAGTCTTTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377210] SGN-U568416 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189564 [Download][View] Facility Assigned ID: FA0AAD7DD06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0268 Quality Trim Threshold: 12.5