EST details — SGN-E377206

Search information 
Request: 377206Match: SGN-E377206
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174710Clone name: TUS-19-H4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174710 is on microarray TOM1 spot ID 1-1-5.4.15.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23454 [cLED-5-H10] Trace: SGN-T49896 EST: SGN-E231280 Direction: 5' Facility: TIGR
Clone: SGN-C174710 [TUS-19-H4] Trace: SGN-T189561 EST: SGN-E377207 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E377206Length: 738 bp (922 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377206 [] (trimmed) TTTGTTTGAATAGCAACAATATTTATATTCCTTACTATATAAATACTAAAATGAAGCAATACAACAACAATACTCTCATAAGAGTATGGATTCTA
AACAAGAAGAAAATTATTAAAATAAATTCAACCCAACCATAGAAAAACAAATATATATATATATGAAAAAATAAAACTCAATAATAACTTCAAGA
AGTGAGAGGTTGTTGTCTTCCATTTTGTCCATCATGAAGTTTGTTATTTGATTTTCTAGGCTTCCTTTTAAGTACAATTATCCAAGTAATTGCTT
CTAAAATAAGAGCAATTCCTCCAATAATTGATAGGAAAATAATATAAGCCAATTTCCATTTGCTTTGTGGTTGTAAAATTTCAAGACCTTTAAAT
ACATTAATGATACCTAGAACAAGTACACCATATCCAACTCCATGATGATACATATTCCAATAAAATCTGTATTTGTGTTCCTTCTTTGGCCTCAG
AAATATTGCAAACACCTGTAGAGTTGCAAGACAAAACAAGGCAATACCAAAATCTCTATGAGAATTGTAAATAATTCCTTTGGATTGGCTTCCAA
GTTTTAGACCAGTGGCCCAACCAGAAACTCCAATAATATAAGATGATATTTGACAAGTCACATGAACATAAAACCATATTGGATCCAAAAATGGT
CTTAGATACCTTGCGATCATAATACAATTGGAAATAAAAATTCCCAACTCACACATTTAAAAATCCATGATTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377206] SGN-U588182 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189560 [Download][View] Facility Assigned ID: FA0AAD7DD02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.925 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5