EST details — SGN-E377148

Search information 
Request: 377148Match: SGN-E377148
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175515Clone name: TUS-21-I17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175515 is on microarray TOM1 spot ID 1-1-8.1.13.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175515 [TUS-21-I17] Trace: SGN-T190338 EST: SGN-E377147 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E377148Length: 522 bp (928 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377148 [] (trimmed) GACATGTATGACCCCGAAGGATATTCTCTCTGGTTTTGTGATTACAAGTACAATGATGAGAACACAGTTTCGTTTGTAACCTTGAACAAGGTTGG
TGGTTTTCTGCAGAGGATGGAGCTGGTACGCAAGTATGCTTTTGGTAAGATGTTGATTGTTGGTTCTGAGGCCCCATTCAAGGTGCAGGGCTTGT
GGCTTTTCCGTGGGAAGGAAATTCCCAAGTTTGTTATGGAGGAAGTGTATGACATGGAACTCTATGAATGGAAGGAAGTAGACATCAATGATGAG
GCCCAGAAGGAGCGAGTTAGCCAAATGATTGAAGATCACGAGCCTTTTGAGGGACAGGCTTTGTTGGACGCCAAGTGCTTCAAGTAAAAAACAAC
ACTGTATTGGAGATTGAGCAATGTTACCTTTTGACTGAGGCTGTAGTTTACTCTGGTTTTGTCCTCCCAAATTTACTTAGATTCTTGTTTTAAAC
ACTATCTTGTCTTAAGAGAAACTATTATCTTTGCAGTGTTTTTTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377148] SGN-U579112 Tomato 200607 Build 2 151 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190339 [Download][View] Facility Assigned ID: FA0AAD9AE09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0072 Quality Trim Threshold: 12.5