EST details — SGN-E377146

Search information 
Request: 377146Match: SGN-E377146
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175511Clone name: TUS-21-I13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175511 is on microarray TOM1 spot ID 1-1-4.1.13.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15391 [cLED-11-M3] Trace: SGN-T51473 EST: SGN-E235463 Direction: 5' Facility: TIGR
Clone: SGN-C175511 [TUS-21-I13] Trace: SGN-T1372 EST: SGN-E378676 Direction: 5' Facility: Giov. Lab
Clone: SGN-C175511 [TUS-21-I13] Trace: SGN-T190336 EST: SGN-E377145 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377146Length: 695 bp (923 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377146 [] (trimmed) CAGGATGCTTGGGAAGAAAATGAAATCTCATTACCCTAGCTTTATTTACAACTTCTGAGTGTATGGCCTTCAGAGACAGAATGAAGGCAGAATTA
GCAGCAGCAACAGTTGGGAAGGACTACTGTTAGATTCAAACTGTGTGCTTCCGCTAGTCACAGGTGCACTCTTCCAATCTCTAACAGATTGGTTT
ACCATCAGCATTTGAAGTCTCAATTGTAAAATTGATTGGGGTCAATGTCTGCACGAGCACTTGACGTGTTTGGCAGCTGCTTTCTGTTCCCTGAT
CGTTAATTGGCCTTCGATCCACCTGTTTGCACAATATCTCTAAGTGATATTATGCTTCTACCTGATCTTGTCGTATCAAGATTGGATGTATGTAC
GAAACTATATTGGCTAGTGACTGCAGTCAACTGTGATTTATGCTGCAATGAACAGACTGGAGAACTCATCGGTTGTGTATGCAAGTTGCATGTCT
TGGAAGTCAATCCGCCCATTGGAAAACAGGATTTCAGTGGACTGTTTTCTGGCAAATCATGAAGACCTGCATATGTTTTAGCAAAATATATTCAA
ATTGCGTTACATCCCTTCATTGAACACACATTAAACATATTTATTGGTTTAGGTTGGCAACCTTTGCGTGTGTTAAGAATAGGTCTCATGATATT
GAAATAAAATAGTCAGCTATACTTANGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377146] SGN-U563805 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190337 [Download][View] Facility Assigned ID: FA0AAD9AE07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0064 Quality Trim Threshold: 14.5