EST details — SGN-E376726

Search information 
Request: 376726Match: SGN-E376726
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174840Clone name: TUS-19-M14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174840 is on microarray TOM1 spot ID 1-1-3.1.15.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23660 [cLED-6-A13] Trace: SGN-T50107 EST: SGN-E233121 Direction: 5' Facility: TIGR
Clone: SGN-C174840 [TUS-19-M14] Trace: SGN-T189341 EST: SGN-E376727 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376726Length: 724 bp (918 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376726 [] (trimmed) ACATGATAATTTCTATCAATAAAAAATCTGTGAGATTTTGATAGGACGTTGAGAAAAAACTTGAAGGAAATACAACAAAATCAATGAGATTTTTC
CTTTGATAGTACCTTTCTCCAGATTAAATAACTGATAAACTTTACTAATAAGAATTGCATATACACGTATTTTCTATCCTCTAATCTAATAAGTA
GTATATTAAAATACCCCAAAAAATAATCACAACGCAAAAGAAGAAGAAAAAGTAGTTACTACATAGACATTTTTTGGAAGGATTCTCTTAGCCCC
ATTATAAGTTCCACCAACAAAGCTATCAGTCCCCCACTAGTCCTACTTATATTATCTTCTTCTTTCAAAATTGTATTTTGTTATCCCCATTCAAG
CAATGAGTGTCTGTCCTTTCATGCTTGCCATTTTCAGTGTTTCTTTATCAAGAAGGTCAACTTCTTATTAGCTGTATCCCAATATTCTCATTTTT
CATGTGTATCATGACCATTCAATTGTCATCTTTTTTTTCCTCCCATATTCTAAAGTCATCTGACCAAAGCAGAGTCTCCCTTTAGGAGTTCTGAA
GTTTGGTATGTGATAACAGATGACTGAATATAAAAAACCTATACACATCTTATTGGTATGTATTTTCTCTTGAAATAGTCTGCTTCCTATTATGT
ACAATTTATCTCTGACTTATTCCTTACTAATGTTATCTCTTCAGTAGAATAATCAAATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376726] SGN-U564615 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189340 [Download][View] Facility Assigned ID: FA0AAD7BG07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.924 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5