EST details — SGN-E376693

Search information 
Request: 376693Match: SGN-E376693
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174602Clone name: TUS-19-C16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174602 is on microarray TOM1 spot ID 1-1-1.3.15.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174602 [TUS-19-C16] Trace: SGN-T189308 EST: SGN-E376694 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E376693Length: 576 bp (924 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376693 [] (trimmed) AAAAAAAAAAAAAAACCTTTTTGGAAAGGGGACATTACTTTATAAAAACCTGATAATTTACCCACATAAAAAAACTTTTTAAAAAAAGGAACAAA
TCCACTTTAAAAATACTTTGAAGGAAAAATTTGAACTTTCACCCCCCCAAAAAAAAAAAACAAAAGTCCCTTGTTGATTTTTTAAAAATCCCTTT
TTTTAAAAAAAAATAATTTAAAACCTGGGGAAGGGCATATTTTTAATAATTTTTTGGGGGAAAAAAACAAAAAAAGCATTTCCAATTTTTGGTCC
AACCAAAAAAAACCAGGGGTCTTTCCATGCTTGCTCGTCGTTGAAAAAAAAAACACCTCCAAAACTCCGGGGGGGGTTGATCCCATTTCCGGGGA
GGGGGAGGGGGGCCAAAAAAACCAAAAACATTGGAAATCCAATAGGAAGGGGGTGGGGCCAAATTCCTGCACCCGGGGGGATCCATTATTTTTAA
AGGGGCCGCCCCCGGGGGGGAGCTCCATTTTTTTTTCCTTTTAGGGGGGGTTAATTTCAAGCTTGGCGAAATCATGGGCATAGTTGTTTTCTGGG
GAAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376693] SGN-U591147 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189307 [Download][View] Facility Assigned ID: FA0AAD7BB08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.819 Expected Error Rate: 0.0240 Quality Trim Threshold: 12.5