EST details — SGN-E376618

Search information 
Request: 376618Match: SGN-E376618
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174168Clone name: TUS-18-A14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174168 is on microarray TOM1 spot ID 1-1-3.1.16.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7153 [cLEC-37-P5] Trace: SGN-T31419 EST: SGN-E208428 Direction: 5' Facility: TIGR
Clone: SGN-C174168 [TUS-18-A14] Trace: SGN-T189233 EST: SGN-E376619 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376618Length: 429 bp (919 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376618 [] (trimmed) AAAGTCAATTGGCAAAACAATTACTTGTAAAGTTTGGGTGAAAACAAATGCTATTTGACAAAATACATCATATTGTAATGAGCTATAACATTCAA
TTGACTAAAGGTTAAATGTGCTTAAACAGATATAATCTACCAATAATCGAGGGATTAAAAGTACTAGTAACCCTTTTTTTTTCAAAAAAAATATA
TAATTTAACCAAAATGAAATAGCCTCATATGTGAGCTTGTATGTGTGATTTACCCTCAAAACACAAGTCAATAGCTAGAGGAAAAAAAAGTACAA
GTAGTATATGTTATAGCCTTTTTGAGTATCCAAAACCAGCACATTTTTTGCAAAGTATTAATCCTGCACCCTTGCAAACTTTGCAGTCTACTAAT
CCTGTTTCTTTTTTCATCTTACCATCGTTGCAAAACACCCACTTTGTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376618] SGN-U581445 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189232 [Download][View] Facility Assigned ID: FA0AAD6BA07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.913 Expected Error Rate: 0.0066 Quality Trim Threshold: 12.5