EST details — SGN-E376538
| Search information |
| Request: 376538 | Match: SGN-E376538 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C173995 | Clone name: TUS-17-J9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173995 is on microarray TOM1 spot ID 1-1-8.2.17.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C173995 [TUS-17-J9] | Trace: SGN-T189151 | EST: SGN-E376537 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E376538 | Length: 601 bp (930 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E376538 [] (trimmed - flagged)
AACAAGCTAAGCAGTAGTACTCCCATTTTGCTAGCTCTGGTTCTCTGCATTAGCCTAACCTCTGTTACCAACGCGCAACAATGCGGAAGGCAAAG
GGGCGGAGCATTATGTGGTGGCAACTTGTGTTGCAGTCAATTCGGGTGGTGTGGATCGACGCCCGAATATTGTTCACCTAGCCAAGGTTGCCAGA
GCCAATGCAGAGGTGGACCAACTCCAACTCCGACTCCAGGTGGTGGTGCACAAGTTCGAGCAACGTATCATATATATAACCCGCAGAATGTTGGG
TGGGATTTGAATGCTGTTAGCGCTTACTGTTCAACTTGGGATGCTAATAAGCCTTACTCATGGCGGAGTAAGTATGGCTGGACTGCTTTTTGTGG
TCCTGTTGGACCACGTGGTAGAGACTCCTGCGGAAAGTGCTTAAGGGTGACAAATACACGTACAGGAGCTCAAACAACGGTCAGAATCGTGGATC
AATGCAGCAATGGCGGACTAGATTTGGACATTAACGTTTTTCGACAAATCGATACAGATGGAGTGGGAAATCAACAAGGACACCTTATTGTGAAC
TACCAATTTGTTAATTGCGGGGACCATGTGA
GGGCGGAGCATTATGTGGTGGCAACTTGTGTTGCAGTCAATTCGGGTGGTGTGGATCGACGCCCGAATATTGTTCACCTAGCCAAGGTTGCCAGA
GCCAATGCAGAGGTGGACCAACTCCAACTCCGACTCCAGGTGGTGGTGCACAAGTTCGAGCAACGTATCATATATATAACCCGCAGAATGTTGGG
TGGGATTTGAATGCTGTTAGCGCTTACTGTTCAACTTGGGATGCTAATAAGCCTTACTCATGGCGGAGTAAGTATGGCTGGACTGCTTTTTGTGG
TCCTGTTGGACCACGTGGTAGAGACTCCTGCGGAAAGTGCTTAAGGGTGACAAATACACGTACAGGAGCTCAAACAACGGTCAGAATCGTGGATC
AATGCAGCAATGGCGGACTAGATTTGGACATTAACGTTTTTCGACAAATCGATACAGATGGAGTGGGAAATCAACAAGGACACCTTATTGTGAAC
TACCAATTTGTTAATTGCGGGGACCATGTGA
| Unigenes |
| Current Unigene builds | |||||
| No current unigene builds incorporate this sequence |
| Chromatogram |
| SGN-ID: SGN-T189152 [Download][View] | Facility Assigned ID: FA0AAD5CE05RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
| Problems: | Possibly chimeric (ends match significantly different genes in arabidopsis) |
| Sequence Entropy: 0.989 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |
Working
