EST details — SGN-E376478

Search information 
Request: 376478Match: SGN-E376478
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174047Clone name: TUS-17-L13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174047 is on microarray TOM1 spot ID 1-1-4.4.17.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E376478Length: 624 bp (911 bp untrimmed)
Status: Current VersionDirection: 3'
>SGN-E376478 [] (trimmed) TTGACTCTCGATTCAAATAGAACCTATTAAAAAAAGCAAGCACGTGAAATAAATATAGTAAACAAGTGGAGAAACAATAATAGCAAATAACAAGT
AATACGAAAACCAAAAAGACACTAAAACTGAAAAACAAGAGAACTAAACTGATTAAAAGATTTAATAGACTCGCGATTCAAATAGAGCCTATTAA
AAAGTCAAGCACGTGAAATAAATACAGTAAACAAGTGGAAAAACAATAATAGCAACAACAAGTAATACGATAACCAAAAAGACACTAACACTGAA
AAACAAGACCTGATCAAAAAATTTATACGAACACACAATTACATACTGACCTCCTATCATAATCCTCGTATTTAACTTGTTATAAGGTAAATAGA
GTTTTATAAATATAGGAACAGATAATAGTATAGCAATTATCACTGATATCTAAAATGAAAGAACCATTGGAACAATGTAAATCAGGATATTGCTG
CACCAGAGGAATATTTATTTTAAACCCAATGTTTGAAGCAGACATGAAATATAGTAATCCTTGGTGATAATACTAGATATCCTAACACAAAGTGA
CATAATCAGCATATTGATAATGCATAATCAAGACCAAGAAAGCATAAATGAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376478] SGN-U565588 Tomato 200607 Build 2 113 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189092 [Download][View] Facility Assigned ID: FA0AAD5CF07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.897 Expected Error Rate: 0.0058 Quality Trim Threshold: 14.5