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EST details — SGN-E376056

Search information 
Request: 376056Match: SGN-E376056
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182818Clone name: TUS-40-I24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182818 is on microarray TOM1 spot ID 1-1-1.1.5.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C127789 [cTOC-3-A9] Trace: SGN-T136594 EST: SGN-E324021 Direction: 5' Facility: TIGR
Clone: SGN-C182818 [TUS-40-I24] Trace: SGN-T187951 EST: SGN-E376057 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376056Length: 635 bp (876 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376056 [] (trimmed) ATTTGTAATTTTGTGCTGTTAATTGTATGTACACAAGAGACGAGAAAGTTTGCCACTATCCAAACAAGCTAAAAGAAGCAAGTGCCACCATAATT
AAGATTTCCTCACTTTTTACAATTGACTGACAATGAGAAAATAAAAGGGGTGAAGGAAAAATGTCCAACATCAGATTTTCCATCCTCTCAAGATA
CAGTTCGTCCATAGCAGAGACAGGAAAGATAGAGATTTTTTGCCCATTTTTCCTTAACATGTGTGCTTGGAAACTGAGATGTTCTCAATGTCTCC
TGAGTCTCATCGCCAGGCCTTCGTCGAGGCACACTCAGGATAAGAGCAGCTTGATCTAATGTAGCAGCTGTTGCTGTAATACGATAACCATTGTC
CCATCGTTTATGAATGCCTTCACTTGGATAAAGAAAATCAAGCTCCACTACCTGGTTACTGACACCTGAATTACGAGACATAACAACCGCCCACC
TACTTCCAGCAGTTGCCATGGAGGTTACATTGAACCCTTCTTTCCACTTCTTGCTTATCCACTTGAATGGGAATGACTCACTTACTTTATAAGAC
TGCTGACTGAACTGTGTGCCTTTTGACATTACAACAAGAGAGCTTCCATTGGTAGCACCAGCAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376056] SGN-U577307 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187950 [Download][View] Facility Assigned ID: FA0AAD28BE12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5