EST details — SGN-C37580
| Search information |
| Request: 37580 | Match: SGN-C37580 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37580 | Clone name: cLEG-42-I1 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177504 is on microarray TOM1: SGN-S1-1-3.4.6.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177504 [TUS-26-L14] | Trace: SGN-T182735 | EST: SGN-E370121 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177504 [TUS-26-L14] | Trace: SGN-T182736 | EST: SGN-E370122 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259462 | Length: 595 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259462 [] (trimmed)
CTGCAGGGTAACCATCTCATGAGACAAAACGTCTTTCTGAAATAGATGATCAAGAGGTTTATTCGACTCCAAATCCCCATACCTAATGTTTTACA
AATACCAATTCTTCAATGAAAGAGTAAAGATCTAGCAAAAATTATCAAAGATGGATTATCTAAAACACTTGTGTTTTACTATCCATTAGCTGGTA
GACTCATTGAAGGGCCTAATAAAAAGCTTATGGTAAATTGCAATGGTGAAGGAGTCTTGTTTATCGAAAGTGATGCTAATATAGAGCTTGAAAAA
TTAGGTGAATCTATTAAGCCACCATGTCCATACCTTGGATTTACCTACTTCATAATGTTCATGGTTCTGATGGAATTATTGGTTCTCCTCTTTTG
TTAATTCAGGTGACTCGTTTTACTTGTGGTGGATTTGCTGTTGGATTTAGATTTAATCACACAATGATGGATGCTTATGGCTTCAAAATGTTTCT
AAATGCGTTAAGTGAATTAATTCAAGGAGCTTCAACACCTTCTATATTGCCTGTATGGGAAAGACATCTCCTAAGTGCTAGATCATCACCAAGTA
TTACATGTATTCATCATGAGTTTGA
AATACCAATTCTTCAATGAAAGAGTAAAGATCTAGCAAAAATTATCAAAGATGGATTATCTAAAACACTTGTGTTTTACTATCCATTAGCTGGTA
GACTCATTGAAGGGCCTAATAAAAAGCTTATGGTAAATTGCAATGGTGAAGGAGTCTTGTTTATCGAAAGTGATGCTAATATAGAGCTTGAAAAA
TTAGGTGAATCTATTAAGCCACCATGTCCATACCTTGGATTTACCTACTTCATAATGTTCATGGTTCTGATGGAATTATTGGTTCTCCTCTTTTG
TTAATTCAGGTGACTCGTTTTACTTGTGGTGGATTTGCTGTTGGATTTAGATTTAATCACACAATGATGGATGCTTATGGCTTCAAAATGTTTCT
AAATGCGTTAAGTGAATTAATTCAAGGAGCTTCAACACCTTCTATATTGCCTGTATGGGAAAGACATCTCCTAAGTGCTAGATCATCACCAAGTA
TTACATGTATTCATCATGAGTTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259462] | SGN-U579318 | Tomato 200607 | Build 2 | 204 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72223 [Download][View] | Facility Assigned ID: TBFGI49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.942 | Expected Error Rate: 0.0084 | Quality Trim Threshold: 14.5 |
Working
