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EST details — SGN-E375753

Search information 
Request: 375753Match: SGN-E375753
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181021Clone name: TUS-35-O3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181021 is on microarray TOM1 spot ID 1-1-6.3.17.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C36620 [cLEG-39-H20] Trace: SGN-T71446 EST: SGN-E257760 Direction: 5' Facility: TIGR
Clone: SGN-C181021 [TUS-35-O3] Trace: SGN-T187522 EST: SGN-E375754 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375753Length: 642 bp (911 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375753 [] (trimmed) GGAAAAATTTTTTGTTGAAGATTAATTTGACATGGTAGCAAAGATGTTTACAAATACAAAACATCCAGAGGAAATTCTTTGAACAGGCACAATCT
TAGAAAAACAATAAAATTATACACTGGCAAAGATAACACTAGAAGTATGGATAAGATCCTCAAAGTACAGATGTCTTGAATCACACTCTGTGACA
TCCAAAGTTTCAATTGTACATGACCAAACATCTATGCCAGTTCACAGAAATGCATCCTTCTCAAGCAGCTTTAGGACATCCTGCTGGTTGTTGAG
TTTGGCAACATCAATTGGCGTCTTTCCGTCCAAGTTTTGAAGAGTTACAGCGGCTCCATTCTCCAGCAGCAGTGCTACACACTCCTTTCTACCAT
ATCCAGCAGCATAGTGAAGAGCAGTATTCTTGTTCTTGTCCAATGCATCAACCTTTGCCCCAGCTTCAACAAGGAGCTGAGCACACTTCTCCTCG
CCATATCCACAAGCAAAATGCAATGCTGTCCTTCCTTCTGAATCTTCTTCATCTTTGTCAGCACCAGCAGCTAGTGCTGCCTTCAAGCCCTCTGC
ATCACCAACACTAGCACACTGATGAACAACAGATTCATCTTTCTTTGCCTTTTCCGTTTTATTTGGCCCAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375753] SGN-U584412 Tomato 200607 Build 2 161 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187521 [Download][View] Facility Assigned ID: FA0AAD23AH02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0087 Quality Trim Threshold: 14.5