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EST details — SGN-E375688

Search information 
Request: 375688Match: SGN-E375688
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180699Clone name: TUS-35-A17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180699 is on microarray TOM1 spot ID 1-1-8.1.17.18 [Order] [Tomato Microarray Database]
See unigene SGN-U581187 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C34519 [cLEG-31-C5] Trace: SGN-T69306 EST: SGN-E255013 Direction: 5' Facility: TIGR
Clone: SGN-C180699 [TUS-35-A17] Trace: SGN-T187455 EST: SGN-E375687 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375688Length: 366 bp (933 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375688 [] (trimmed) AAAGTGATATATTCCTCAACCCAATTTCATCTACTAGTTTCGCGTAAAGAGTCAGCAGCTTTTCCGATTTTCTGATCAGATTCAGATTTGTTTGG
ATTTTGATGGCTTCGAAACGAATATTGAAGGAGCTGAAGGATCTCCAGAAGGATCCTCCTACTTCATGCAGCGCTGGCCCTGTTGGAGAGGACAT
GTTTCACTGGCAGGCTACAATAATGGGGCCCTCTGATAGCCCTTATGCTGGGGGTGTTTTTTTGGTCACGATCCATTTTCCTCCGGATTATCCAT
TCAAGCCTCCTAAGGTTGCTTTTAGGACAAAAGTTTTCATCCAAATATCAATAGCAAGGGGAGTATATGCTGGGACATACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375688] SGN-U581187 Tomato 200607 Build 2 117 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187456 [Download][View] Facility Assigned ID: FA0AAD23AA09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5