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EST details — SGN-E375440

Search information 
Request: 375440Match: SGN-E375440
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180376Clone name: TUS-34-D6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180376 is on microarray TOM1 spot ID 1-1-3.4.19.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C33111 [cLEG-25-G5] Trace: SGN-T67968 EST: SGN-E253045 Direction: 5' Facility: TIGR
Clone: SGN-C180376 [TUS-34-D6] Trace: SGN-T187209 EST: SGN-E375441 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375440Length: 329 bp (932 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375440 [] (trimmed) AAGGCTACAAGCCATATGGTTCTATAACAGTATAAAAATTTAAAATATCAAGTTTTTGGCCAACACTTATATACTTCAAAAGCTATAACGTGATA
CATATTTCAAAACATGCACACCCAAATGTGTCCTGTTTGATCAAATTTTTCATTCAAAAAATGCAAATTTCGCCAACATGAAAAAAACCCTCATC
ACTTTTGAAATTGAACAGATTAGGAACCGGGGTTTGGGTCTTTAACTGTTTTGAAGTTGACAACGCTCATACCAAATCGACCCAAAATGGAATTT
CCCATTTCTTTGAGCTTGCCAATCATTTCCTCTTTCATCTTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375440] SGN-U585333 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187208 [Download][View] Facility Assigned ID: FA0AAD22DB03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.912 Expected Error Rate: 0.0148 Quality Trim Threshold: 12.5