EST details — SGN-E375107

Search information 
Request: 375107Match: SGN-E375107
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181323Clone name: TUS-36-K17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181323 is on microarray TOM1 spot ID 1-1-8.3.14.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23844 [cLED-6-I1] Trace: SGN-T50214 EST: SGN-E233228 Direction: 5' Facility: TIGR
Clone: SGN-C181323 [TUS-36-K17] Trace: SGN-T187664 EST: SGN-E375106 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375107Length: 555 bp (898 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375107 [] (trimmed) GTCTATCTGAAGAAAAAAAAGATTAATTATTTCAAAGTAATTTGATATGTAAGATTTACAGATCTCTGTGAAATCTTCCTTGCCGTAACTTCTGC
TCATTAAGTCATTCTACTTCTCTCCCTTGCCTTGGTTTCCACAAGTACTTGCTTCTCCGCAGATGCGCTTCTGCAGATGCTCCAACCTAGCCTCT
CGCGTTTTGCATTCTACAATCATGGTTGGGCATATGACCATTTTCAGGCGCTGGATAGTTCAGGTCATCATGTTCAGGGACAGCAGCGTCTGCTG
ATGAGTCGAAAGGACTACTAGTGAAAGATGGCATCATTACTGTCGATATCTCAGACATAGCTTGGAATAGAGGATTCAACCCAGTAACTCTTTTA
ACAGTTTCTTCAGCCATCTTCACCTTTGCTCTCAATGTCTCAACATCGGCTTTCAATACTCTATTGTCAACTGCTGCTTCATTGTACTTCTGGCT
TATGTCAGTCAAGCGTTTCAATAAAGAGGAGTTTTCTACTCTTACTTGAGAGACCTGCGTCTCTAGTTCTGTCAGATGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375107] SGN-U572089 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187665 [Download][View] Facility Assigned ID: FA0AAD24AF09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0002 Quality Trim Threshold: 12.5