EST details — SGN-E375089

Search information 
Request: 375089Match: SGN-E375089
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181229Clone name: TUS-36-G19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181229 is on microarray TOM1 spot ID 1-1-6.3.14.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23469 [cLED-5-H24] Trace: SGN-T49710 EST: SGN-E231094 Direction: 5' Facility: TIGR
Clone: SGN-C181229 [TUS-36-G19] Trace: SGN-T1670 EST: SGN-E378714 Direction: 5' Facility: Giov. Lab
Clone: SGN-C181229 [TUS-36-G19] Trace: SGN-T187646 EST: SGN-E375088 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375089Length: 672 bp (899 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375089 [] (trimmed) CAGGTTGGGACTTGAGATCAGCTATATTTCAATATTCTATATTTTGAGTTCTCTAATGCTAGGTGAAATGCGTGTAGTTCCAGTTTAATAAAGAA
AGAGCTGTATTCTAAAAATGAAATATATCAAGTGTACCATTTAAGTTGATTTACCAGTATTTACTAAAAATAATAATCTCAGAATGTCTTAAGTT
AACAATCACCTTCTAGAATAATTTTGTATTCTAGGATGTGTATTATTAAAAGAAAGAAATTACCATTAAAATGAAAAAATAATTTAAACAGCCCA
CTGTATTATATTGAACAGAATTCTAGAACCTGCCATTGAACAATCTGCCAAAAAAGGTCAATCATTACACTTGTAAGGTGCTTGAATGTCCACGT
CTATATCCACAAATATTTCACAGCACACAATATCTCCTCATCCCAATAAACCTTATCAAGAATTCAATCTCTGAAAGAACAAAAAAACTTAAAAT
CCTGTATTGTTTGTTTGTTTGATTTTAGTTTGAAATAAAATCTAAAAAAGCAAAAAAAGTTGTCAATTTTGTGAATTTAAAATATGTAAAATATT
ATTATCTACTCTCATAATTTTAAAAATATTACATGGAAAGTATTATCTTTTAAGTAAATTATTTTTGTTAGGAGTAAGATAAGGAAAAAATGGGG
AATTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375089] SGN-U573488 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187647 [Download][View] Facility Assigned ID: FA0AAD24AD10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.899 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5