EST details — SGN-E375072

Search information 
Request: 375072Match: SGN-E375072
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181173Clone name: TUS-36-E11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181173 is on microarray TOM1 spot ID 1-1-6.1.15.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23101 [cLED-4-H8] Trace: SGN-T49522 EST: SGN-E231753 Direction: 5' Facility: TIGR
Clone: SGN-C181173 [TUS-36-E11] Trace: SGN-T187631 EST: SGN-E375073 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375072Length: 601 bp (885 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375072 [] (trimmed) AAATTATCACAATGAAATATAATCTTATAACATTAATTGAATCAACATAAATTAAGTACAAATTCGAAGGCAATATGCCTCATCAATTTCAACTA
ATTAAGGCATCCTCTCATGCCTAAAAATCAATTTTTTGTTTCTATATTTCACTTGAAACACTCACTAACCAATCTTATTTTGTTGACTATTATCA
AATGACAATTTCAAGTCAAACAAATTCCTAAACACAAAATCACCTTACAATTAAAAATCATTCGCCACGATCAAACCTCTCTATAACAACATCAT
CTGTTCAAATATGTTTTGACTGTTACAACGAGATGTTGTTATAGAAGACAGAGAATATGATCGTATTTTCGTCTTCAACTAATGAGTGATGTATA
GAGAAGAAGGTTCCAAGTATCAGGCAATCCAGGGAGACACCAATGACTACAATCTAAAGTGTTGTGATCACTATAAGAAGTTGGATGTGCATCTT
TTCTATATTGAGAAAGTGTTGTAATGTCCAATAAATGAACTGATTTTTTAATTCTACTTAGTACTTTGTTAACCACAATGGCTGCTTGAGTTGTT
CCTCCTGGATACCTTATCCCAAAAAAATGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375072] SGN-U575598 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187630 [Download][View] Facility Assigned ID: FA0AAD24AC06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.924 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5