EST details — SGN-E374791

Search information 
Request: 374791Match: SGN-E374791
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172840Clone name: TUS-14-J6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172840 is on microarray TOM1 spot ID 1-1-3.2.20.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C11026 [cLEC-6-P12] Trace: SGN-T24237 EST: SGN-E202576 Direction: 5' Facility: TIGR
Clone: SGN-C172840 [TUS-14-J6] Trace: SGN-T188100 EST: SGN-E374792 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374791Length: 532 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374791 [] (trimmed) GAGCATTGTTCAATATTTTTTCGTGTTCGTGCGAATGGGAAAATTTTAATGTGCGGAAAAGACGCCTTTGCCATTCATTATTGCTAAAATAGAAA
ATATTCACCATTTTAAAAATATTTATGCTATAGAATGAGACTTGGGGAGAGAATTCTTGCGTACACTAATGTGGATAAGTTCCCAGCTCAATTCT
AAATCATTTTTTACCAACTCTATCTCCTATATTGACAAAATGAATGATTTATAAAGAGGTATTGGGGCTTATCCCCAAAATTAAAAAAATAGTAT
TACTTAATTTTACTACTCAATTCTTACTTGATTTTTGTTGAGTTATCACCCACAAATACTCATTTTCACTTGAGGATTTTGATTTTCTAATAAAA
TTCCCTTTTCACCTTTTTCTCATTTAATAATTTTTCTTGCTGATTTTGCCCTTCAAACTTTAATTGTTTGTCATTATAACCCTTTTGACAAAGAT
TTTCCGTCATGATCGTTTAACGTTGTTCTGAGGCAGAGTATAGGAAAAGCTTCAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374791] SGN-U584997 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188099 [Download][View] Facility Assigned ID: FA0AAD2DE03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.915 Expected Error Rate: 0.0201 Quality Trim Threshold: 14.5