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EST details — SGN-E374761

Search information 
Request: 374761Match: SGN-E374761
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172662Clone name: TUS-14-B20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172662 is on microarray TOM1 spot ID 1-1-5.2.20.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C10768 [cLEC-6-D21] Trace: SGN-T24163 EST: SGN-E202502 Direction: 5' Facility: TIGR
Clone: SGN-C172662 [TUS-14-B20] Trace: SGN-T188068 EST: SGN-E374760 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374761Length: 601 bp (866 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374761 [] (trimmed) GGGAGAGAAGGCTTTGCCGACTGCATCCAAAGATGAGAAGTCTGGGGCAGCTGAGAGTAAAAAATCTCCTGAGTCTTCTACCGTGGAAGCACCAT
CAGGAGAGGGGAGAACAGCATCTGCTGCGGCTGGAGCTGGAGTCCAAAATCCCTTTGATTTCTCAGCCATGTCTGGACTGCTCAATGTACATACA
CGTTTCTATGCAGAATAAAAGTTCTGTTATGTTCAAATATTTTAAATAGTAAATATAATTACATATTTAATTTCATTTTGGTTGAATACATGGTA
TTTGAGATGTGAAAGTACATGTGGGTTACAAACTACTTAGATGCAAAAACAAAGCTCCCGCACTTGGTGATAACCTATTAAAATTATATCTTAGT
TATGCAAAAAAGAAAAAAGTTCTATTACCATCAACTTGCAATCAATTATACTTTTAGTTTTGCTGCCTTTCTAGTCATTTTATTTTTGTTGATTA
ACAAACTTTGAATTATTTATATAGTGTCTTTTGGTTTTATTCTGCACATCTCTTTTATGTTGTGGCTGATGCAGGACCCAAGTATCAAAGAACTA
GCTGAGCAGATTGCAAAAGACCCTGCATTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374761] SGN-U584409 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188069 [Download][View] Facility Assigned ID: FA0AAD2DA10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5