EST details — SGN-E374714

Search information 
Request: 374714Match: SGN-E374714
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172838Clone name: TUS-14-J4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172838 is on microarray TOM1 spot ID 1-1-5.2.20.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C11022 [cLEC-6-O8] Trace: SGN-T24151 EST: SGN-E202490 Direction: 5' Facility: TIGR
Clone: SGN-C172838 [TUS-14-J4] Trace: SGN-T188023 EST: SGN-E374715 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374714Length: 663 bp (894 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374714 [] (trimmed) GCCAGAAAATCTTATTATTTTATTTGGGTCTCACCACAGGAAAGGAAGCTAAATAAGAGGGGTACACTGAAACAACACAGAAAAGATACATGAAA
ATATAACTAGTAAACATACATGCATCAGCAGGTAATAATAAAACAGTAGCGAACAAAAGCTGCTATCGACATGGAGATACTGCTTCTTCAAATCA
CTTGTGTAGAGGCGATTTTTGGAACCCACACTAGATTATCTGATGGAAAAAAGTGACAGATAGGGGATGTTCCTGGTAATATACCGAGCAATTGG
AAAGATGCATGAGATGGACTCCACTCAGAAGTATCCAAATGACAAACAGCAATTGCTTCCACTCTATCACCATTTTCACCCCCTAATGAAACCTT
AAACACTTTGCTCTTGCTAATTGTGTAATGACAGTAGAAAATCGCGTAAGCGTAAGGCATGGTATGACATGCCACCATCTTGGGAGTTTCTACTT
CTTGAGGAGCATCCAAAATAGTATACTCTTGAAGTGGGGGAGTTGAGTTTGAGAAATGAGTTGTGGACAGAGCTTTGAATTGAGTTTTCTCTCCC
ATGATTCCTTGAACAAAATCAAGCATTGCCTCCGCGGATGTGGCACAGTACTTTGTCTTTCCCTTAATATGTGGAGCCTCACATTTTTTCAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374714] SGN-U573242 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188022 [Download][View] Facility Assigned ID: FA0AAD2DE02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5