EST details — SGN-E374700

Search information 
Request: 374700Match: SGN-E374700
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172760Clone name: TUS-14-F22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172760 is on microarray TOM1 spot ID 1-1-3.2.20.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C10906 [cLEC-6-J3] Trace: SGN-T24177 EST: SGN-E202516 Direction: 5' Facility: TIGR
Clone: SGN-C172760 [TUS-14-F22] Trace: SGN-T188007 EST: SGN-E374699 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374700Length: 622 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374700 [] (trimmed) AACAACCAACCGATGCACCCTCAAATGTCATTTATGCAGCAACAGGGAATTTATGGATTTGGGCCTCGGCTGCCACTCTCAGCGATTCACCCATC
CTCTTCAACACCCAGCATGTTTAATGCACCAGCAAGTTCCCAGCCCGCTCTCAGTCATTCAATGCTTAGACCTGTATCTGGGACAAAAACAGGTT
TAGGTTGAGTGCAGATAGTGATTGAGCTTTGGATTTGCTTCAGTTTACTGATCGGTTCTCTTCATTTCTGCAATTATTGAGGCGAGAGAACAAGT
TGCATTGCTCTGTCAGACGGATTGAGACATTAATGAAGCCAATCGACTGAAGATGCAGCTCGGACTGACAGTGCAATGGCCTGATTACCCAAGCA
GGACTTCTCACATTAGTTGCTGCTTTATGCAGCTAAACTTATTCGTAGAAACAACTTGTACTATATTTCGGTTTCTACTGTGACATGACTCTCTT
TTGGTAACAAGAAGTATGAGACTAGGGGTCTAGACATGTAGTTTTGTGCAGTACAGGTAATTAAGATGGAGAAAACAGGGCAATGGAGTATGGCA
GTTTCTTTGATCATACAAGTCGTGTAACTAAATTGTTGTGCTGATTTCCTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374700] SGN-U571046 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188008 [Download][View] Facility Assigned ID: FA0AAD2DC11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0102 Quality Trim Threshold: 12.5