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EST details — SGN-E374646

Search information 
Request: 374646Match: SGN-E374646
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173227Clone name: TUS-15-J9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173227 is on microarray TOM1 spot ID 1-1-8.2.20.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173227 [TUS-15-J9] Trace: SGN-T188875 EST: SGN-E374645 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374646Length: 615 bp (934 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374646 [] (trimmed) CCAGGCCATAGTTCCTTTTAGTATTTTTTTTTCTTTTACAGTCATTCCGAGACAGAAATCCATTTTGTTTATGTGTGTGTTGTCCCTATACTCCA
TTTAATAAGAGTCCTACGTGCTATTGAAGCTGCTGAAATGGAAAGGTACCAGATAATTAAAGAAGTTGGTAATGGTACATTTGGAAATGTTTGGC
GTGCACTTAATAAGCAGACTGGTGAAGTGGTTGCGATTAAAAAGATGAAGAGGAATTATTATTCGTGGGAAGAATGCATAAACTTGAGAGAGGTC
AAGTCTCTGAGAAAAATGAACCATTCAAATATCGTGAAGCTCAAGGAAGTGGTCAGGGAGAACGACATTTTGTACTTCGTGTTTGAATACATGGA
GTGCAATCTATACCAACTTATGAAGGACAGAGCAAAGCTTTTCTCAGAATCCGAAGTGAGAAATTGGTGCTTCCAAGTATTTCAAGGTCTTGCTT
ACATGCATCGACAAGGATATTTTCATCGTGACCTTAAGCCAGAGAACTTGTTGGTTTCGAAAGAAATAATTAAAGTTGCTGATTTTGGTCTTGCT
CGGGAGATCAATTTTTAGCCTCCATATACGGAATATGTATCAACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374646] SGN-U567968 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188876 [Download][View] Facility Assigned ID: FA0AAD3CE05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5