EST details — SGN-E374577

Search information 
Request: 374577Match: SGN-E374577
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173193Clone name: TUS-15-H23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173193 is on microarray TOM1 spot ID 1-1-2.4.19.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1819 [cLEC-13-P9] Trace: SGN-T26162 EST: SGN-E204409 Direction: 5' Facility: TIGR
Clone: SGN-C173193 [TUS-15-H23] Trace: SGN-T188808 EST: SGN-E374578 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374577Length: 707 bp (887 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374577 [] (trimmed) GAGATATTTAAGATTCTTAAAGAAAATTAATGTTGAATGTAAAAATAGAAAAAATAACTATCTTTTCTTAAGTTGATAAAAGTAATAAATAAAAA
TAATATATATGTTTTTAAAATAATGGACGAATAAAATTAAACGAAAGAGTTAATAAGTTAATTTCGACAATGAATAAGAATCGAGAAGAACTTAT
TCATAAATTGTATTCGCCGAATGTGTTTTATGTCTTTCTCTCAACGCTTTCTATTTAGGATTAGGAATACGCGTAATCGGACCTAATCCTACATC
ATTACATTCCATTTAGGATTAGGAATACGCGTAATCGGACCTGCTTTTTACATATCTCTATTGGGACCAAAGTAAAAAGATCTCTGGTATAAGGG
ATGACGAATGTAAGAGAGTGAAGCAAAAAGATCATGGCAGATAAAAAGGCGTTAATGAAAATTCGGTGGAGCTAATTCACTAGTTTTCCCCATAC
ATGCTCAACAATGGATGTTGAAAGATTAGAATGACTTTGCATTGAAGCTGTGCATTGACTGAGATAACAGAGAGATATGAAACCGAATGCTTACT
CTGATATGACTCGAGAATGAACAAAGCTACCCCACATATCATTTTATCCATAAAGCTCAATGATCCATACACAAAAGCACAGCCATTGAGATCTC
GCCCAACCAAGACACTTTGCATGCCCACTCCAGTTACCATTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374577] SGN-U566743 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188807 [Download][View] Facility Assigned ID: FA0AAD3CD12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.944 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5