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EST details — SGN-E374474

Search information 
Request: 374474Match: SGN-E374474
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182200Clone name: TUS-38-P6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182200 is on microarray TOM1 spot ID 1-1-3.4.10.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C85844 [cLET-41-D1] Trace: SGN-T110565 EST: SGN-E298528 Direction: 5' Facility: TIGR
Clone: SGN-C182200 [TUS-38-P6] Trace: SGN-T187745 EST: SGN-E374475 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374474Length: 732 bp (905 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374474 [] (trimmed) ACTATAAAGTAACTTTCATTTATCAGATTATTTTTTATCACAAGCTTTAGAACCCTTTAAAATACCACAGAACAATCACACACACATACACCATT
TTTTGTATAATTATGTGTTTAATTAACTAAGTTTGTATAACTTCCAAGAACATAATAATTTTCTTTAAGCACTTGCAATTTGATCAACTAATTCC
ACATTAGCTTCCATAGCCTTCATTGCTTCAAATCTTGGCTCTTTTGGCTGAAACTTTAGTCCAGCATATAACTTCATGTAATCATCAAACACGAA
TTTCGGATAAACTTGCTTGCTTTCCTCAATTAGAGATGGTGCTGGATAGATCACCGCGTCATTTCCTGGATTATAAAATGATGCTAGTGACATCC
GAGTCCCATCTGTTTGTGCAATCACTCTGTGCATCACGCTCTTGTACTTCCCGTTGGTAATCACCTCAAGCTGGTCACCAAGGTTAACCACAATA
GAGTGGCGCATGGGAGGAACATCGATCCATTGCTCGTCTTTGAGGAGTTGAAGGCCACTCACTTTGTCATCTTGGAACAGAAGTATGATGCCTCC
AGCGTCTGTATGAGCGCGGAGTCCCTTGATCAAATCGGGCTTAGGACATGGTGGATAGTTGCTAACTTTAGTACCGAAATTGGGACCTTTTGATC
CATAAAAGGCATTTTTTCAATACCTTTTTCAAGTCCAAGATTTTCACAGAGTAAGTCAAGTAACTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374474] SGN-U578701 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187744 [Download][View] Facility Assigned ID: FA0AAD26DH03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0038 Quality Trim Threshold: 14.5