EST details — SGN-E374471

Search information 
Request: 374471Match: SGN-E374471
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182162Clone name: TUS-38-N16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182162 is on microarray TOM1 spot ID 1-1-1.2.10.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C85263 [cLET-38-K6] Trace: SGN-T109986 EST: SGN-E297907 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374471Length: 695 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374471 [] (trimmed) AAACAAAATATATCAAGATATAAAAAAATCTTTTGTTCCATTACATAAAGAAAAAAACTGGGAAGATTTAAACAAAATTCCTCAACAACAAGATC
ATCTAAATTACATGCTGGGACATTCAAAGAAAGCTGCAAATACTTTGATAACTCATACGATGTTAAAATATAGAAAGCACAAAGACACACAAATT
TTAAACCAAAAAAAGAAGTCATTGATGCTTAGTTGCATGTGTAAACTACACTTGAATACCTGGGATCAACCTCATAAAAATCAGTCTTGCCCTCT
AAAGCCGGCTGCAAAGAAATGCCAGACAAAGATCTAGTTCCTTGGGATGAAAACTTTACATAACCAAAAAGCTCTAGCTCTACCACATCATCATC
ATCATTAATATCAATGGGGAACCTCGCCTTCAATTTGCCAGGATGACCCTTGAGCGGAATCTCATCAACATGCCATTTCAGTTCTCTCTCAGAGC
GGTTCAACACAGCTTTAGGTGAAACTTTCAATAATGTTGGGTCCACTGGCAATTTCAGGACAAAGGTCACATCGGTTAATGGAACTGGAATATCA
GGATTTGCAACGTACTGCAGCATTACAGAAAGTAATGACCCGCTAAGACGCTTAACAAGTCGAATCCTCAAAGGCAACGGAGTTAAACGCGGTAG
CAAACTGTACTTAATAATTGGTATAGGCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374471] SGN-U572325 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187741 [Download][View] Facility Assigned ID: FA0AAD26DG08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0132 Quality Trim Threshold: 12.5