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EST details — SGN-E373828

Search information 
Request: 373828Match: SGN-E373828
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179198Clone name: TUS-31-C4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179198 is on microarray TOM1 spot ID 1-1-5.3.2.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179198 [TUS-31-C4] Trace: SGN-T185269 EST: SGN-E373827 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373828Length: 733 bp (900 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373828 [] (trimmed) ATATAAGAAAAATCCATTATATTGTCTAGTAAACTCACAATTACAACTTTACAAGGCCATCAATTTATGATATTCATTTTCCAGGAACAAAGTTT
GTGGCAAAGGCCCAGGCATTGTTATTAACTGGATCCGCAAGGTGGTCAGCGAGGTTCTCCAATGGACCCTTTCCGGTAACAATGGCCTGAACAAA
GAACCCAAACATAGAGAACATAGCAAGTCTGCCGTTCTTGATCTCCTTAACCTTAAGCTCAGCAAATGCCTCCGGGTCTTCAGCAAGGCCTAATG
GGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACAACCTCACCAAGAGGTCCACCAGCAATGCGGTATCCCTCAACGGCTCCCATCAACACAACT
TGGCAAGCCCAGATGGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAATCAAGTCCACCCTCGCTGAAGATCTGGGATCCAGC
CTTGAACCACACAGCCTCACCGAACTTGACACCATTACGGGCCAATAGCTCAGGGAAGACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGT
GGATCACCTCAAGTTCACGGTTCTTGGCAAAAGTTTCAGGGTCTGCTGAAAGTCCAGCGGTATCCCAGCCGTAGTCACCAGGGAATTCACCGGTC
AAGTAGCTTGGGGACTCACCAGAGAATGGGCCCTAGTACTTAACACGGTCTGGTCCATACCATGGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373828] SGN-U577305 Tomato 200607 Build 2 49 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185270 [Download][View] Facility Assigned ID: FA0AAD19BB02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5