EST details — SGN-E373817

Search information 
Request: 373817Match: SGN-E373817
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179156Clone name: TUS-31-A10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179156 is on microarray TOM1 spot ID 1-1-7.1.2.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76526 [cLES-18-E6] Trace: SGN-T101526 EST: SGN-E289084 Direction: 5' Facility: TIGR
Clone: SGN-C179156 [TUS-31-A10] Trace: SGN-T185260 EST: SGN-E373818 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373817Length: 697 bp (925 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373817 [] (trimmed) TACATTCTACATATTTTTAATTTAAAACAACAAGATTCAAAGTAAGTCTTATGCACTTTCTTAAACTCTGTTTTAAGTCAAAAACCTAACAAATA
AATTAAAACAAAGGGAGTACTAGAGTTGTTGCAGGATCTAAAGAACATGGTCTAAAGAGGATTCCAACTTCAATGTCCAGGTAGCAAAGTACATC
TTCATCTTCACAGAGGTAAAACCAAAAACGAAATTGAAAGATTCAAACAGCGATGAAATTTCACTCAAATTTCATGATCAATTCAAATGAATAAA
AAACGTCAAGCCGAATCGATGAGATTGTTGTTAAGAGAACAATCTTAATACCTGATCTATTGTATACACCAGCAGCCAACTAAATATAACAAGCA
AAAGTGTGGCAGCTAGATAAGCCAGATAGCATTTTATTAAGAATCAGAAGATCTTCACAATTCTGGCTTCATGTTCTCGCATTCCTCTCTTATTG
ACTGGAAAAGAATAGAGGAGAGGTATCGTTCCCCATAGCTTGGAAATACAACCCCAATAAGCTTTCCTGCATTCTCAGGTCTCTTTCCAACTTGA
ATGGCAGCAAGAGCAGCTGCTCCGGAAGAAATCCCAACCAACAACCCTTCTTGTAGGGCTAATTGCTTCGCAGTTTCAACAGCTTCGTCACTCGA
TATCTCTATCACTTCATCCATTACATCTTGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373817] SGN-U565168 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185259 [Download][View] Facility Assigned ID: FA0AAD19BA05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5