EST details — SGN-E373653

Search information 
Request: 373653Match: SGN-E373653
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180266Clone name: TUS-33-O16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C141833 [cTOF-18-A22] Trace: SGN-T157340 EST: SGN-E345619 Direction: 5' Facility: TIGR
Clone: SGN-C180266 [TUS-33-O16] Trace: SGN-T186617 EST: SGN-E373652 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E373653Length: 602 bp (934 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373653 [] (trimmed) GACACCAAAAATCTTATATAGAAAAAACTCTTCTCCAACATTTCGAAACTCCATTGTTTCTCTTTCTAAAGCTTTCTCTCACCTCCCAGGTTTTA
ATACAGAGAATTGAAGTTATGGGGAATAGAGTGGATCATGAGTACGATTACTTGTTTAAGATCGTGTTGATTGGTGATTCTGGAGTTGGAAAATC
GAACATTCTGTCTAGGTTTACGCGAAATGAGTTCTGTTTGGAGTCAAAATCTACTATTGGAGTTGAGTTCGCCACTAGAACTCTTCAGGTTGAGG
GAAAGACAGTCAAGGCCCAAATATGGGACACTGCAGGCCAAGAACGGTACCGAGCCATTACCAGTGCTTATTACAGAGGAGCAGTTGGTGCACTC
CTTGTTTATGACATAACAAAGGGACAAACATTCGACAATGTTCAAAGGTGGCTCCGAGAATTGAGAGACCATGCAGATTCTAACATTGTCATTAT
GATGGCTGGAAACAAGTCCGACCTTAACCACCTTCGAGCAGTCTCTGAGCAGGATGGTCAAAATTTAGCTGAGAAGGAAGGACTGTCATTTCTTG
AGACATCGGCATTGGAAGCAGTCAACGTAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373653] SGN-U569324 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186618 [Download][View] Facility Assigned ID: FA0AAD21BH08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0013 Quality Trim Threshold: 14.5