EST details — SGN-E373484

Search information 
Request: 373484Match: SGN-E373484
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179190Clone name: TUS-31-B20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179190 is on microarray TOM1 spot ID 1-1-5.2.2.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76641 [cLES-18-K7] Trace: SGN-T101670 EST: SGN-E289228 Direction: 5' Facility: TIGR
Clone: SGN-C179190 [TUS-31-B20] Trace: SGN-T185623 EST: SGN-E373485 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373484Length: 729 bp (882 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373484 [] (trimmed) TCAAAAAAATTAGCTTGATTGTCCATTTGGCTATGCTTGTATAGCAGCAGTACATGTTCTAAAAGAAGTACTAATGAAAATACAGGAAGATTTCC
TGGTACTACAGGAAAACATAAAAGTATAAGCTGAAAATTACAACTATTTTTATCTCTAAGGACAATGGTTTCTACCTGTAAATCAACTAACATTG
CCATTATTTATTTCTTTGTTTTGATAAAGGTCAGCTTGCACGTACCTCAACTACTCTCAAGGGGACCAGCTAGCTACCTCCCACAAGCCGTGGAA
TGATGAGATCATTGTTTTACACAAAAAGAGCAAATATGTGAAATTTATTCATCAGAAAACAGCTTCATCGGTAGAACCAGGCAAACCTTTAAGAA
CATCCCTCAACGCATAATAATGGCTATCACACTTGTGGGCAGAAATTATGTTATTTGAGAGCAGTATCCTCTGAAAATGCTCCCCCGAGTGTCTC
TTCCAAAGTGTGAAACATTCCACACTGTTACCTTCCTTTCTTGCATTTGCATTCCTCTTCAAAATATAAAGAGTTCCGGGGACAAACAACTCAGC
TTCGCCTTCCTGTCTCACAAGAGATGATGTATTGACTTTGGAGTTGGAGGTATCAGGAACACGTGGAACTGTAGACTCAGAGTGCTTAGTTTGGC
TTCGTAATTTAGCATAATCAGCAAGTCTCCGAGCTACATCTTGCACAGAAGATACAACCTGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373484] SGN-U564638 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185622 [Download][View] Facility Assigned ID: FA0AAD19DA10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5