EST details — SGN-E373444

Search information 
Request: 373444Match: SGN-E373444
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179378Clone name: TUS-31-J16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179378 is on microarray TOM1 spot ID 1-1-1.2.2.13 [Order] [Tomato Microarray Database]
See unigene SGN-U581507 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C82144 [cLET-1-A5] Trace: SGN-T102325 EST: SGN-E292051 Direction: 5' Facility: TIGR
Clone: SGN-C82144 [cLET-1-A5] Trace: SGN-T102326 EST: SGN-E292052 Direction: 3' Facility: TIGR
Clone: SGN-C179378 [TUS-31-J16] Trace: SGN-T185583 EST: SGN-E373445 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373444Length: 679 bp (924 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373444 [] (trimmed) AAAGATCAAAATCATATAACTTTAGTATTTCTGAAAATAAACTTCCATTTTTCTAAATGGGCATACAGAATCCCCTTATTGATTACATCCAAATA
TAACTTATAGACTTCACAACGTAATACATAAACATAATTTGCATTCTCTCTCTATATATAAATAAAGACGCTTAGCCCTGGGCGAAGTTCTTTTG
ATTGTTACAGTCCAAATTTTCACCAGTAGGAACATTCAACATACCACAATACCTCCTGTAAAATCCAATTCGACTTTCCGCTGCAGTATTCGGAC
CCATCCCACATTCAAATTGACCGTTAATGATGTTGGTAATGACACCGTACCCTGGAACTCTATTAGCTGCTGTATCTTTAGGGGATGGCGTCCAT
TGTCCAATGATAACGTTGTGGCATGATGGTTTATTATCCTGTTCTGTCATCCAGAACCATATTGCTGTTTTGAATGATATTATAGGATCTGTCGC
AACTAAATCAGGGTTGTTCACTAACTCTTGTCCAACACCAATACCTTGTCCAGCTCGTTCGTAGTTAGATTGGTGTGTCAATTGGATAGGTCCTC
TGCCATAGTATCTGTCTGACTGCTCTATTTGCTTAACAAAGCAATATCCTCCAGTGAATGTTCCTGCACTACCACCATTAGTTTCGTGAGATGTT
TGACCGAAAAAGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373444] SGN-U581507 Tomato 200607 Build 2 59 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185582 [Download][View] Facility Assigned ID: FA0AAD19DE08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5