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EST details — SGN-E373215

Search information 
Request: 373215Match: SGN-E373215
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179175Clone name: TUS-31-B5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179175 is on microarray TOM1 spot ID 1-1-4.2.2.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76592 [cLES-18-I12] Trace: SGN-T101703 EST: SGN-E289261 Direction: 5' Facility: TIGR
Clone: SGN-C179175 [TUS-31-B5] Trace: SGN-T185352 EST: SGN-E373214 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373215Length: 693 bp (905 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373215 [] (trimmed) GTGGAGCTGTTTTGGTTAGTGGGAATGAACTCAAATTGGCACTTGGTGCTGGATTTGATCCTACCAAGTGTATTTTTAATGGAAATGGAAAGCTG
TTAGAGGACCTAGTGCTAGCTGCCCAAGCAGGTGTGTTTGTAAACATCGACAGTGAATTTGACTTGGATAACATTGTAGCAGCTGCAAGACTGGC
TGGGAAGAAAGTTAACGTGCTACTCAGGATTAATCCAGATGTAGATCCCCAGGTTCATCCTTATGTTGCCACTGGGAATAAGAGCTCCAAATTTG
GCATCAGAAATGAGAAGCTGCAATGGTTTCTAGATGCTGTCAAGGCACATCCTCAGGAATTGAAACTTGTTGGAGCTCATTGTCATCTTGGGTCA
ACTATCACCAAGGTAGACATTTTTCGAGATGCAGCTGCCTTGATGGTGAACTACATTGACGAAATCCGATCTCAAGGATTTGAAATTGATTACCT
GAATATTGGAGGTGGTTTAGGGATTGATTACTATCATGCTGGAGCTATCCTTCCTTCACCTAGAGATCTTATTAATACGGTACGAGAATTAGTCC
TTTCTCGAAACCTCAATCTCATTATTGAACCTGGAAGATCACTAATTGCAAACACATGCTGCTTGGTTAACAGAGTTACTGGAGTGAAAACCAAT
GGGACCAAGAACTTTATTGTGATTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373215] SGN-U576140 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185353 [Download][View] Facility Assigned ID: FA0AAD19CA03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5