EST details — SGN-E373147

Search information 
Request: 373147Match: SGN-E373147
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179597Clone name: TUS-32-C19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179597 is on microarray TOM1 spot ID 1-1-6.3.1.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82461 [cLET-1-P4] Trace: SGN-T102536 EST: SGN-E292262 Direction: 5' Facility: TIGR
Clone: SGN-C179597 [TUS-32-C19] Trace: SGN-T1537 EST: SGN-E378699 Direction: 5' Facility: Giov. Lab
Clone: SGN-C179597 [TUS-32-C19] Trace: SGN-T185811 EST: SGN-E373148 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E373147Length: 554 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373147 [] (trimmed) AATATCTCAATCCATGATATCATATTCCTCAAACTTTATCTTATCCAAGAAACTTAGAACAATATTTCTAAAACCACATTAAAAAAAGAACAAAT
ATAAGAAATAAAAAATCAAAAGAAAAGGCGAAACAAAAGCCAACATGCAGCCTATAGTAAGCTTTGTCACATAAGGGATGAAACATTTATATTCC
AGTTTAAGCTTCAGGCTTGTCCCACTTGAGAGGCTTAACTACTTCCCATGTGAAGTCAGGATCATCTCTACCAAAATGCCCATAGGCAGCAGTCT
TCAAGAATCGACCATTGCCACCCCTCAGTAGATCGAGGTTAATGGAAATCATTCCGGGCCTGAAATCAAAGTTCTCCTTCACAATGTTGAGAATC
TCCTTGTCAGGGATCTTCCCAGTTCCATAAGTGTCCACAAAGACGGACAATGGCTCAGGCACACCGATGGCATATGAAACCTGAACAATGCACCT
TCTGGCAAGACCGTTAGCAACAATGCTCTTAGCTGCTTGCCTCACGATATAGGCTCCACTTCTGTCGACCTTGGTAGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373147] SGN-U577991 Tomato 200607 Build 2 93 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185810 [Download][View] Facility Assigned ID: FA0AAD20AB10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5