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EST details — SGN-E373055

Search information 
Request: 373055Match: SGN-E373055
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179585Clone name: TUS-32-C7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179585 is on microarray TOM1 spot ID 1-1-2.3.1.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82445 [cLET-1-P1] Trace: SGN-T102691 EST: SGN-E292417 Direction: 5' Facility: TIGR
Clone: SGN-C179585 [TUS-32-C7] Trace: SGN-T185717 EST: SGN-E373054 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E373055Length: 681 bp (917 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373055 [] (trimmed) AATGCCGGCCGGTCATGGTTTGAGGTCTCGAACGAGAGATTCATTCTCTCGCGCCTTCAGGAAGAAGGGTACCATCGCACTTTCGACCTACTTGA
GGATTTTCAAAATCGGAGATTATGTTGATATCAAGGTGAATGGTGCTATTCACAAGGGAATGCCTCACAAGTTCTACCATGGACGTACTGGTCGT
GTTTGGAATGTTACCAAACGCGCCGTTGGTGTTGAAGTCAACAAGCAGGTTCGTAACAAGATCTTAAGAAAGAGGATCCATGTGAGGATTGAGCA
TGTCCAGCAATCTCGATGCACCGAAGAAGTCAGGGAAAGGATCAAGAAGAATGACCAACTTAAGGCTGACGCCAAGGCTAGAGGAGAAGTCATCA
GCACAAAAAGGCAACCACTAGGACCCAAACCAGGGTTCATGGTTGAAGGTGCTACTCTGGAGACAGTTACCCCCATACCATATGATGTGGTTAAT
GATTTGAAGGGAGGATATTGATCTTAATCTGTTTCTGAGAGGTTGTTTTTTCTATTTGGTTTTTCTGAAATTGAAAGACAGAATTAGTTTTGTTG
GTGTCAACTCCAGACATTGCTTGTTAGTTAAATTTTGTTTACATTGCCATTAGAGGCCTTTTGTTGAACTTTTACTACAAAGGTGAATTCAAGTA
TGTCTATCTATTACCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373055] SGN-U578089 Tomato 200607 Build 2 121 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185718 [Download][View] Facility Assigned ID: FA0AAD20AB04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0032 Quality Trim Threshold: 12.5