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EST details — SGN-E372981

Search information 
Request: 372981Match: SGN-E372981
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179621Clone name: TUS-32-D19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179621 is on microarray TOM1 spot ID 1-1-6.4.1.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80074 [cLET-11-C9] Trace: SGN-T105253 EST: SGN-E292790 Direction: 5' Facility: TIGR
Clone: SGN-C179621 [TUS-32-D19] Trace: SGN-T186135 EST: SGN-E372982 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372981Length: 711 bp (904 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372981 [] (trimmed) ATAAAAGATTCATTCAGAATCTGTAAGCTCTGCAATTGAAATAAGGTCCGCCCAAACAAAACAGTAATAACCCTTCAACAAGGGAAACGAGTGTG
GGGTTTTTAAGCTTTGACCCACTCTAAGATTTTTCGAATTATTACAAAAAAAAAGGCAAAAGGAATAATGATAATTGTCTCCCCAACTGAATACT
CAAATGTAACACCAAAAAGATTTTCATCACCATCTAAATTCTAAAGGATGTTACGAGGCTGACTTAGGCACCACCAGATCCGTATTTCTTTCCCA
AAACAAGAACCTGAAGCTTGTCATATCCAGCCAACACACCAGCACCAGCAACAGCTCGGAGGATGTTAGCACCAGCACCCTTGAACAGAGATTTG
GGACCCTCATTCTTAACAATCTGGGAGAATGCATCAAGCGAGCTCTTGTACTTCACCGCCTCACCAGATGTCATCATCATTCTTCTTCTTACTGT
ATCAATGGGGTAAGAAGCAAGACCAGCACCATTGGTGATGAGCCAACCAAGTGCAAAGCTAGCAAAGAAACTATCCTGCAGGTTTCCTGTCAAGA
GGACAGGCTTCAAGGAGTCGTACATTCCAAAGTACAAACCACGGTAAACAATGATACCAACACATGAAATGTTGAATCCACGGTATAGACCAGCA
ATTCCATCACCTATTTTGAGAGAGAGATTCGATGCAGGGGCTTAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372981] SGN-U577960 Tomato 200607 Build 2 307 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186134 [Download][View] Facility Assigned ID: FA0AAD20CB10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5