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EST details — SGN-E372781

Search information 
Request: 372781Match: SGN-E372781
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179846Clone name: TUS-32-N4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179846 is on microarray TOM1 spot ID 1-1-5.2.1.13 [Order] [Tomato Microarray Database]
See unigene SGN-U578975 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C86728 [cLET-44-B16] Trace: SGN-T111355 EST: SGN-E298719 Direction: 5' Facility: TIGR
Clone: SGN-C179846 [TUS-32-N4] Trace: SGN-T186261 EST: SGN-E372780 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372781Length: 666 bp (899 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372781 [] (trimmed) TCGAGTTTCCATAACCCTAATCTAGCTCCACCATGGCCACCGCCGCAGCTACATCCTCGTTCATCGGAACACGGCTACCGGAAATCCACTCCGGC
TCCGGTAGAGTCCAAGCCCGATTCGGATTCGGACAGAAAAAAGCCGCACCGAAAAAGGCTGCGAAGAAGCAAATTCCGGACAGACCGTTGTGGTA
TCCAGGAGCTAAGGCACCGGAGTATCTAGACGGAAGCCTTGTAGGTGACTACGGATTCGATCCGTTCGGTTTGGGGAAACCGGCGGAGTATTTGC
AATTTGATTTGGATTCGCTGGACCAGAATTTGGCGAAGAATTTGGCTGGTGACATTATTGGAACGAGAACTGAAGTTGCTGATGTGAAATCAACT
CCGTTTCAGCCTTACAGTGAGGTTTTTGGACTACAGAGGTTCAGAGAATGTGAATTGATCCATGGAAGATGGGCTATGTTGGCTACTCTTGGTGC
ACTCACTGTTGAGTGGCTCACTGGTATTACATGGCAAGATGCCGGAAAGGTTGAGTTGGTTGAGGGATCATCCTACTTAGGGCAACCACTCCCAT
TCTCCATTACAACATTGATCTGGATTGAGGTTCTTGTCATTGGATACATCGAATTTCAAAGGAACGCCGAGCTTGACCCAGAAAAAAGGCTCTAC
C
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372781] SGN-U578975 Tomato 200607 Build 2 245 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186262 [Download][View] Facility Assigned ID: FA0AAD20DG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.992 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5