EST details — SGN-E372758

Search information 
Request: 372758Match: SGN-E372758
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179750Clone name: TUS-32-J4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179750 is on microarray TOM1 spot ID 1-1-5.2.1.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80663 [cLET-13-A3] Trace: SGN-T105875 EST: SGN-E294032 Direction: 5' Facility: TIGR
Clone: SGN-C179750 [TUS-32-J4] Trace: SGN-T186238 EST: SGN-E372757 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372758Length: 725 bp (917 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372758 [] (trimmed) CGCAATTGCTGTTTCAAGATTGTGTTTTTTTTAGTACCCTTTTGTTAATTTTCATTGTTTCTTGATTTTGCAACTTGAAAAATGGTTGTGGGTGT
TCTTGCTTTACAGGGATCTTTCAATGAACACATTGCAGTTTTGAAAAGATTGGGAGTGAAAGGTGTGGAGGTGAGAAAGCCAGAGCAGTTGCTGA
ATGTTAGCTCCCTAATCATCCCTGGTGGGGAGAGCACCACCATGGCCAAGTTGGCTGAGCTCCACAATTTGTTCCCTGCTTTGCGTGAGTTTGTT
CAAATGGGGAAGCCAGTATGGGGGACATGTGCAGGTCTCATTTTCTTGGCAAATAAGGCCACTGGGCAGAAAACCGGAGGACAGAAACTAATTGG
AGGCCTTGATTGTACTGTACACCGTAACTTTTTTGGAAGCCAGATTCAAAGCTTTGAGACAGAACTTCCTATTCCTCAAGTCGTAGCTGAAGATG
GTGGTCCTCCAAGTTTTCGTGCTGTTTTCATCCGTGCTCCGGCAATCCTTGATGTAGGACCAGACGTTGAAGTATTGTCAGACATTCCTCTATCA
GCCATAGAAACTCTTAATTCCAATCCTGCTATTCAAAAGGAAGAGGAATCTACCGAGTCTGGAAAGAAAGTAATTGTTGCTGTAAAGCAAGGGAA
CTTACTAGCTACTGCTTTTCATCCCGAATTAACTGCAGATCCTCGATGGCACAGTTATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372758] SGN-U567386 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186239 [Download][View] Facility Assigned ID: FA0AAD20DE02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5