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EST details — SGN-E372590

Search information 
Request: 372590Match: SGN-E372590
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179351Clone name: TUS-31-I13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179351 is on microarray TOM1 spot ID 1-1-4.1.2.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77412 [cLES-20-N3] Trace: SGN-T102274 EST: SGN-E290595 Direction: 5' Facility: TIGR
Clone: SGN-C179351 [TUS-31-I13] Trace: SGN-T185046 EST: SGN-E372589 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372590Length: 710 bp (908 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372590 [] (trimmed) GGAAAAAATGGCAACCGTGACAACACAAGCTTCCGCCGCCATTTTCCGGCCGTGTGCTTCAAGAACCAGGTTCCTTACTGGATCATCTGGAAAGT
TAAACAGGGAGGTCTCTTTTAGACCTTCAACTTCTTCGTCTTACAACTCATTCAAGGTTGAAGCTAAGAAAGGTCAATGGCTTCCTGGCTTAGCC
TCTCCTGATTATCTTGATGGCAGTCTCCCAGGAGACAATGGTTTTGATCCATTGGGACTTGCGGAGGACCCAGAGAACTTGAAATGGTTCATCCA
GGCTGAACTGGTGAATGGTCGTTGGGCTATGTTGGGTGTTGCAGGGATGCTGTTGCCTGAAGTTTTCACTAGCATTGGGATACTTAATGTGCCCA
AATGGTACGATGCTGGAAAATCAGAGTACTTTGCATCATCATCCACCCTGTTTGTGATCGAGTTCATCTTGTTCCACTACGTCGAGATCAGAAGG
TGGCAAGACATTAAGAACCCAGGAAGTGTCAACCAAGACCCTATCTTCAAGAACTACAGCTTGCCTCCTAATAAATGTGGATACCCTGGTGGTAT
TTTCAACCCACTCAACTTTGCACCAACTGAAGAGGCCAAGGAGAAGGAACTTGCTAATGGGAGATTGGCTATGTTGGCATTTTTGGGATTTATAG
TGCAGCACAATGTGACTGGGAAGGGACCTTTTGACACCTTCTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372590] SGN-U579906 Tomato 200607 Build 2 222 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185047 [Download][View] Facility Assigned ID: FA0AAD19AE07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5