EST details — SGN-E372568

Search information 
Request: 372568Match: SGN-E372568
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179259Clone name: TUS-31-E17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179259 is on microarray TOM1 spot ID 1-1-8.1.2.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77186 [cLES-20-D20] Trace: SGN-T102122 EST: SGN-E290443 Direction: 5' Facility: TIGR
Clone: SGN-C179259 [TUS-31-E17] Trace: SGN-T185024 EST: SGN-E372567 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372568Length: 659 bp (908 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372568 [] (trimmed) TTTTAAAAAAGAAAAATACTTCTCATTCATATATTGATTAATTTATTGTTGAAACACGAATTACAAGCTATAGCATTGGCAACTCTTCTACATAA
TATTAATAGCAATGCCTATTTTTTTGTAATATAAATTCAAACAGTAGGGAACGAAGCAACCTTTGCAATGCCACAATGGCCACCATCAACTCCAA
CATCTCTAGCAATTCTCATATATCCTTCCTCACCCCAATCACTCCCCCATGAATTCTTCACTATCCAATATTTTGTACCATCTTCTTCACTTGTC
CCATAACCTATAACTGTCACTGCATGATTCAGTCTAGAATTACAACTTCCATCATATATTCCACTTCCGTACATATGAAACTCATCGTTAGCCGC
AATACCAACAGAAATAGGTTGATTCACTACAGCTTTCAACAACGATGACTCGTCAGATGGTACGACTTCGTAGCCATTGATAGTAACTGCTGCTG
GTTGTTCGGTCTTGCAAACAGAATATCAGAAAAGGACATTGCTTTATAACTGGAAACAATTTGGTGAATGGAAAAAAGAATCCTCCACCTTGTCA
AATAACCAAGAAACTGAAGCATTGCAGGTACCTCAGCTTTTCATTAAGGGGGTTAACTATACAGCTGGAATTGAAAATGATAGAGGAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372568] SGN-U580776 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185025 [Download][View] Facility Assigned ID: FA0AAD19AC09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.952 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5