EST details — SGN-E372479

Search information 
Request: 372479Match: SGN-E372479
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179636Clone name: TUS-32-E10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179636 is on microarray TOM1 spot ID 1-1-7.1.1.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80099 [cLET-11-E10] Trace: SGN-T105301 EST: SGN-E292838 Direction: 5' Facility: TIGR
Clone: SGN-C179636 [TUS-32-E10] Trace: SGN-T1542 EST: SGN-E378556 Direction: 5' Facility: Giov. Lab
Clone: SGN-C179636 [TUS-32-E10] Trace: SGN-T185975 EST: SGN-E372480 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372479Length: 704 bp (937 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372479 [] (trimmed) AATTGTTAACCATTCTGATTAGTTGATAATCTCATGTAACATCCCAAATACAAGTACAGAAGAATGACTTGGAGGGAGAGAAAAAAAAGAAACTT
GAAAAGCATTTGAATTTTCTATAGTTAAAGCATGAAAAATCCAAAGCAAAAACTAAAGCAACATGTAAAATTTAACTGGTTCTAACTTCATTCAA
GATGATCTTCTTCTGAACTTTACTACTTCCTGGTAGCCAACCACCATCAATGGAGTCCATATCCCCACTTAATCCATCGTCCATGAAGTCCCCAA
TCCTTTTAACTTTGCCCGTTGGCTCGACAGGATAGTTGCCTGAAAAGCAAGCATAGCAATAACTTTTAGAATCACTGCCTAACAGCTTATTCAAG
CTCTCAATTGGGAGAAAGGCTAGTGAATCCGATCCAATGTACTCCCTAATCTCCTCCACACTCATTCTGTTAGATATCAACTCCTCTGAGCTGGG
AGTGTCCACTCCGTAATAACAAGAAGCTATAATCGGAGGGCTTGCAATCCTCATATGAACTTCTTTTGCCCCTGCCTCCTTTAACAGCCTCACAA
TCTTGGACGAGGTTGTCCCTCTAACAATCGAATCATCCACAACCACAACTCTTTTCCCCTCCAACACTGCCCTAACTGGTGAGAGCTTGAGTTTC
ACTCCGAAATCCCTAATCTTCTGTGATGGTTCGATGAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372479] SGN-U569321 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185974 [Download][View] Facility Assigned ID: FA0AAD20BC05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5