EST details — SGN-E372352
Search information |
Request: 372352 | Match: SGN-E372352 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179041 | Clone name: TUS-30-L15 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179041 is on microarray TOM1 spot ID 1-1-2.4.2.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C78622 [cLES-6-E10] | Trace: SGN-T98576 | EST: SGN-E287124 | Direction: 5' | Facility: TIGR |
Clone: SGN-C179041 [TUS-30-L15] | Trace: SGN-T184793 | EST: SGN-E372353 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E372352 | Length: 796 bp (920 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E372352 [] (trimmed - flagged)
ACAGTTGAATAAAATCACTGTTGCATTGCCTTGCACATTATCCACATGACAGAGAAAAGGAACATCGAAATCCTTTCAAACATTGTCCAAACTTA
CTTATCATATTAGTAGTAACTGTAACATTCATTTCCTTAGATTACTCAGAACTCTCTGTCCGGGAACAGAATTGGAGCAACCTGAGACCAGATGA
ACAAAGCTGCAGTTGCCCACCCAGTCACGATCCTGACCCAGACAGATGGCCACCCAACGTCCACTAATTTTCCACTCTCCCCCACAGAGGTTGAC
CAACCCGTAAGAAGCATTGCCGAGTACATACTAGCGAGAGAAAAGATAAGGTGGAAGAAAGAATAGGAGTATGAGACTGGCTTAGATCTCTCTTT
TTCTTCCTCCTCATCAACCTTGTCCAACGGTAGCAAGGGCTTCCCTGAGGTGATTGCTGCCACTAATTTTGCTGAGTCACTGGATAAGGCTTTGG
TGAGACCTGGACGATTTGATCGCAACATTGTTGTCCCAAATCCTGATGTTGAAGGGCGGAAGCAGATTTTGGAATCTCACATGTCAAAGATTCTG
AAGGCGGATGATGTTGACCTTATGATCATTGCTCGGGGGACTCCTGGATTTTCTGGTGCAGACCTTGCAAACTTGGTGAATATCGCTGCTGTGAA
GGCTGCTATGGATGGTGCCAAAGCCGTAAGCTTGGCTGATCTAGAGCATGCGAAGGACAAGATCATGATGGGAAGTGAGCGCAAATCAGCTTTTA
TATCCCAAGAGTCGAGAAAACTTACAGCATACCATG
CTTATCATATTAGTAGTAACTGTAACATTCATTTCCTTAGATTACTCAGAACTCTCTGTCCGGGAACAGAATTGGAGCAACCTGAGACCAGATGA
ACAAAGCTGCAGTTGCCCACCCAGTCACGATCCTGACCCAGACAGATGGCCACCCAACGTCCACTAATTTTCCACTCTCCCCCACAGAGGTTGAC
CAACCCGTAAGAAGCATTGCCGAGTACATACTAGCGAGAGAAAAGATAAGGTGGAAGAAAGAATAGGAGTATGAGACTGGCTTAGATCTCTCTTT
TTCTTCCTCCTCATCAACCTTGTCCAACGGTAGCAAGGGCTTCCCTGAGGTGATTGCTGCCACTAATTTTGCTGAGTCACTGGATAAGGCTTTGG
TGAGACCTGGACGATTTGATCGCAACATTGTTGTCCCAAATCCTGATGTTGAAGGGCGGAAGCAGATTTTGGAATCTCACATGTCAAAGATTCTG
AAGGCGGATGATGTTGACCTTATGATCATTGCTCGGGGGACTCCTGGATTTTCTGGTGCAGACCTTGCAAACTTGGTGAATATCGCTGCTGTGAA
GGCTGCTATGGATGGTGCCAAAGCCGTAAGCTTGGCTGATCTAGAGCATGCGAAGGACAAGATCATGATGGGAAGTGAGCGCAAATCAGCTTTTA
TATCCCAAGAGTCGAGAAAACTTACAGCATACCATG
Unigenes |
Current Unigene builds | |||||
No current unigene builds incorporate this sequence |
Chromatogram |
SGN-ID: SGN-T184792 [Download][View] | Facility Assigned ID: FA0AAD18CF08FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Problems: | Possibly chimeric (ends match significantly different genes in arabidopsis) |
Sequence Entropy: 0.985 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |