EST details — SGN-E372352

Search information 
Request: 372352Match: SGN-E372352
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179041Clone name: TUS-30-L15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179041 is on microarray TOM1 spot ID 1-1-2.4.2.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78622 [cLES-6-E10] Trace: SGN-T98576 EST: SGN-E287124 Direction: 5' Facility: TIGR
Clone: SGN-C179041 [TUS-30-L15] Trace: SGN-T184793 EST: SGN-E372353 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372352Length: 796 bp (920 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372352 [] (trimmed - flagged) ACAGTTGAATAAAATCACTGTTGCATTGCCTTGCACATTATCCACATGACAGAGAAAAGGAACATCGAAATCCTTTCAAACATTGTCCAAACTTA
CTTATCATATTAGTAGTAACTGTAACATTCATTTCCTTAGATTACTCAGAACTCTCTGTCCGGGAACAGAATTGGAGCAACCTGAGACCAGATGA
ACAAAGCTGCAGTTGCCCACCCAGTCACGATCCTGACCCAGACAGATGGCCACCCAACGTCCACTAATTTTCCACTCTCCCCCACAGAGGTTGAC
CAACCCGTAAGAAGCATTGCCGAGTACATACTAGCGAGAGAAAAGATAAGGTGGAAGAAAGAATAGGAGTATGAGACTGGCTTAGATCTCTCTTT
TTCTTCCTCCTCATCAACCTTGTCCAACGGTAGCAAGGGCTTCCCTGAGGTGATTGCTGCCACTAATTTTGCTGAGTCACTGGATAAGGCTTTGG
TGAGACCTGGACGATTTGATCGCAACATTGTTGTCCCAAATCCTGATGTTGAAGGGCGGAAGCAGATTTTGGAATCTCACATGTCAAAGATTCTG
AAGGCGGATGATGTTGACCTTATGATCATTGCTCGGGGGACTCCTGGATTTTCTGGTGCAGACCTTGCAAACTTGGTGAATATCGCTGCTGTGAA
GGCTGCTATGGATGGTGCCAAAGCCGTAAGCTTGGCTGATCTAGAGCATGCGAAGGACAAGATCATGATGGGAAGTGAGCGCAAATCAGCTTTTA
TATCCCAAGAGTCGAGAAAACTTACAGCATACCATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T184792 [Download][View] Facility Assigned ID: FA0AAD18CF08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Problems: Possibly chimeric (ends match significantly different genes in arabidopsis)
Sequence Entropy: 0.985 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5