EST details — SGN-E372316

Search information 
Request: 372316Match: SGN-E372316
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178891Clone name: TUS-30-F9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178891 is on microarray TOM1 spot ID 1-1-8.2.3.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71329 [cLER-17-I24] Trace: SGN-T95841 EST: SGN-E282990 Direction: 5' Facility: TIGR
Clone: SGN-C178891 [TUS-30-F9] Trace: SGN-T184757 EST: SGN-E372317 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372316Length: 430 bp (955 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372316 [] (trimmed) AATTTATGGCCTTCGTATTGGGGGCCTGGTTCAGTCATCAGTACCACAACAAAGCAGCATATTATTATTATCATCACAGAACAAGCATACAAAAA
AAAGCAACCAAAACATACTAAAACTTCACTAGCAATACATATTTTAAATCAAACAAGTTCCTCACAACCCATCAGGGTAAGCGACACCAGTAGAT
TTTAACCATGCTGCTCCTTGAATCAGCTGACCCACAGTGAATTTCGCGGCCTCTGATTTAGTCAAGGCTTTATGATAACCAGGCCAGTTCACTCT
CTTACTAGTTCCAGCACCAGCTCCTCTGTTCATGTACTCACCATAATACAATGTTTTCAATGCAAAATCACCGCTCCATTCTGACCAACCTGCTG
GATCAATATGGTCTCCAATGTTGGACTGCATATACACGGTCCGTGAATAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372316] SGN-U585819 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184756 [Download][View] Facility Assigned ID: FA0AAD18CC05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0078 Quality Trim Threshold: 12.5