EST details — SGN-E372141

Search information 
Request: 372141Match: SGN-E372141
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178898Clone name: TUS-30-F16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178898 is on microarray TOM1 spot ID 1-1-1.2.3.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71357 [cLER-17-J6] Trace: SGN-T96078 EST: SGN-E283227 Direction: 5' Facility: TIGR
Clone: SGN-C178898 [TUS-30-F16] Trace: SGN-T184934 EST: SGN-E372142 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372141Length: 721 bp (921 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372141 [] (trimmed) AGCACTGGAAAAGGAGAAATATCATTGATCATTATAGCGAAAAGAATGTGATGTACTATGACTTAAACAAGAAAGAATAGATTTTCCTATGTCTA
CTCAAACTTGATCAATCTATAATTTTATTAATTATATTCTTTTGTGTGTGTGTATTCACACGAGTTGTTACAGTTAAGAAGAAGAAGAGAAAAAA
AAAAAACTAATTAAGTTTCCAACTTCCATCATCACATGGGGAACAACCTTCTTGAGCAATGTCAGTGATTTGAAGTCCAGTATCATAAACCACCC
CATTTTTCCAATCTGATGGCAGCACTGATTTAGCCCAAATCCACTTGCCATCGTACCCTGCTGTCACTACAAACCTGAATTGCAATGCCCCACTT
GGCACTCTGCTTGTATCCCAAATTGCTCCGTGGTTTCGGCTCAAGAAGTTCCAGTTCGACGATCCAACCTGAGCAACATCAACACTGACAATTTC
AGTTTGACCACCCTGGTAGAAGATGCTAATTGCTAGGTAATGCGGCTTCTGGCTTGATTCATCTACTCGAACAGCCAAATTCTTGCCTTTGTAGT
CACAAGGAACTCTTTTGTATTCAACATCGGCGATTCCCAATTTGTGAACATCTTGAGCTTTTCCCTCAATGGCCATAGCCATAAAAGCTCTGCTA
CTGATGACAAAATCAGTCTGGTTATTCGTATTTAGATCAGTAACCATCACAGTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372141] SGN-U583056 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184933 [Download][View] Facility Assigned ID: FA0AAD18DC08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5