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EST details — SGN-E371896

Search information 
Request: 371896Match: SGN-E371896
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178910Clone name: TUS-30-G4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178910 is on microarray TOM1 spot ID 1-1-5.3.3.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71407 [cLER-17-M15] Trace: SGN-T95800 EST: SGN-E282949 Direction: 5' Facility: TIGR
Clone: SGN-C178910 [TUS-30-G4] Trace: SGN-T184509 EST: SGN-E371895 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371896Length: 681 bp (913 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371896 [] (trimmed) GAAAAGTGTACAAGGTTTAGGGGTTTCAATTGATGTTGTTGTGTCTTGTCTTGCTAGTCGAAATGGTGGGGTAAAAGATTCTTGGAATATCGATT
ATGAGGCAACAAAGAATAGTCTTGTTGCTGGGAGGAAGTTTGGGGCTTCACACTTTGTTTTGCTGTCTGCAATTTGTGTTCAAAAGCCCCTTCTT
GAATTTCAAAGAGCTAAGCTGAAATTCGAGGCGGAATTGATGAAAGAAGCTGAAGAAGATAATGGATTTACTTATAGTATTGTTAGACCTACTGC
ATTTTTCAAGAGCTTAGGAGGTCAGGTTGAATTGGTGAAAGATGGGAAACCTTATGTGATGTTTGGGGATGGAAAGTTGTGTGCTTGCAAGCCGA
TAAGCGAACAAGATTTAGCTTCTTTTATGGCTGATTGTGTACTGAAAGAGGATAAAATCAATCAGGTCTTGCCAATTGGAGGACCTGGGAAGGCA
TTGACACCTTTAGAACAAGGGGAAATGTTGTTTAAACTTGTGGGGAAAGAACCCAAATTTCTCAAGGTGCCAATTGAAATAATGGATTTTGCAAT
AGGATTTCTTGACTTCCTTGTAAAAATATTTCCTTCGTTGGAAGATGCGGCCGAGTTTGGGAAGATTGGTAGGTATTATGCTGCTGAGAGCATGT
TGATTTGGGATCCTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371896] SGN-U586592 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184510 [Download][View] Facility Assigned ID: FA0AAD18BD02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.945 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5