EST details — SGN-E371885

Search information 
Request: 371885Match: SGN-E371885
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178864Clone name: TUS-30-E6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178864 is on microarray TOM1 spot ID 1-1-3.1.3.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71259 [cLER-17-F24] Trace: SGN-T96068 EST: SGN-E283217 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371885Length: 749 bp (918 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371885 [] (trimmed) AAAATAAACAGTACATTTCACGTAAACATAGCTAGATAAATCTTCTTTAAATAAAAGATACAATACGTGTTTTATCCACAATGAGCTCCATAACT
AATATCATGGCTAATTTTTCAATTGCTAGGGTTCTTTAAACTCACTTCACATGCTTGGTAAACCAGTCCAACATATCCTGATGAGCTTCTTCAGC
ACTCTGCACAGCCTTCTCGTCTTCCACGTTGTATCGAACAGTCCATCCATGGGAAACTCCGGGATAAATTTTCACAAAGCAGTCCACCTCAGGTT
TTGATGATAAAATCTCCTCAAACTGCTTAACAAGCTCAGGAGGAGATAGCTGATCTATTTCAGCTCCTAAAATAGCTATTGGTGCCTTCACCTCT
TTAATATCATCCACAGAGACAAATGATGGGTGCAATAGCACTGCAGCTTGAACGTTGTCGGACTTGGCTAATTCAACAACCACCTTGCCACCCCA
GCAAAACCCTGCCGCTCCAATTGGAGATATGCCTTTATCTTTTAAAGCTGCAATAACCTGCTTTGCGTCTTCAAAACCTTTATCTGTTCCATGTG
ATTGTATCCAGACTTGTATAGGCTTCTCCTTATTTTCGGGATTGTAAGGATCCCCATAAAGAAAATCAGGAACGACCACATAGTAACCCCCAGCT
GCAACTTTGTCGGCAAGCTTCCTCAGATTTGGTGCTTCATAACCATAAACATCGGAGATGAGAAGAATGGCGTATTTAGAATTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371885] SGN-U581818 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184499 [Download][View] Facility Assigned ID: FA0AAD18BC03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5