EST details — SGN-E371655

Search information 
Request: 371655Match: SGN-E371655
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178526Clone name: TUS-29-G4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178526 is on microarray TOM1 spot ID 1-1-5.3.4.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72164 [cLER-1-F6] Trace: SGN-T91981 EST: SGN-E280427 Direction: 5' Facility: TIGR
Clone: SGN-C178526 [TUS-29-G4] Trace: SGN-T183983 EST: SGN-E371654 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371655Length: 660 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371655 [] (trimmed) CAAAGGTATATGAATCTCGTGTATTCTATGAGAAGACGTTGAAATCAATTGATGAATTGGTGGGATTACTTGCATAATAATATCATCAGGCTCAA
AGGTGAGTGAATGTTGTAGCAGAAAAATCGCGTTGGTTTAACAAATAAACTGATCGAAAAACGTTGAAATTATATACAATTTTAATAGACGCAAC
CAAAAAAAAAAACAAAAAAATAATTTCTGCTTTCAGTTTCTTCTTTTGTAAAACCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTT
GCACTCATTGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGTTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTT
TTGAAGGTTTCGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCACAAAGGCA
CAGTTGGATGAAATTCTCGGACCTGCTGAGTGCACCATTGTTGATAACCTGTCAAATGACTATGTTGATTCCTATGTGCTGTCCGAGTCGAGCCT
CTTCGTTTATTCTTACAAGATAATCATCAAAACATGTGGTACCACAAAGCTGCTTCTTGCAATTCCGCCCATTCTGAGGTTGGCTGAGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371655] SGN-U580882 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183984 [Download][View] Facility Assigned ID: FA0AAD17BD02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5