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EST details — SGN-E371653

Search information 
Request: 371653Match: SGN-E371653
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178498Clone name: TUS-29-E24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178498 is on microarray TOM1 spot ID 1-1-1.1.3.1 [Order] [Tomato Microarray Database]
See unigene SGN-U578975 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C72134 [cLER-1-E15] Trace: SGN-T92038 EST: SGN-E280484 Direction: 5' Facility: TIGR
Clone: SGN-C72134 [cLER-1-E15] Trace: SGN-T92039 EST: SGN-E280485 Direction: 3' Facility: TIGR
Clone: SGN-C178498 [TUS-29-E24] Trace: SGN-T1494 EST: SGN-E378393 Direction: 5' Facility: Giov. Lab
Clone: SGN-C178498 [TUS-29-E24] Trace: SGN-T183981 EST: SGN-E371652 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371653Length: 674 bp (858 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371653 [] (trimmed) TTTCCATAACCCTAATCTAGCTCCACCATGGCCACCGCCGCAGCTACATCCTCGTTCATCGGAACACGGCTACCGGAAATCCACTCCGGCTCCGG
TAGAGTCCAAGCCCGATTCGGATTCGGACAGAAAAAAGCCGCACCGAAAAAGGCTGCGAAGAAGCAAATTCCGGACAGACCGTTGTGGTATCCAG
GAGCTAAGGCACCGGAGTATCTAGACGGAAGCCTTGTAGGTGACTACGGATTCGATCCGTTCGGTTTGGGGAAACCGGCGGAGTATTTGCAATTT
GATTTGGATTCGCTGGACCAGAATTTGGCGAAGAATTTGGCTGGTGACATTATTGGAACGAGAACTGAAGTTGCTGATGTGAAATCAACTCCGTT
TCAGCCTTACAGTGAGGTTTTTGGACTACAGAGGTTCAGAGAATGTGAATTGATCCATGGAAGATGGGCTATGTTGGCTACTCTTGGTGCACTCA
CTGTTGAGTGGCTCACTGGTATTACATGGCAAGATGCCGGAAAGGTTGAGTTGGTTGAGGGATCATCCTACTTAGGGCAACCACTCCCATTCTCC
ATTACAACATTGATCTGGATTGAGGTTCTTGTCATTGGATACATCGAATTTCAAAGGAACGCCGAGCTTGACCCAGAAAAAAGGCTTTACCCAAG
TGGATCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371653] SGN-U578975 Tomato 200607 Build 2 245 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183982 [Download][View] Facility Assigned ID: FA0AAD17BC12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5