EST details — SGN-E371616

Search information 
Request: 371616Match: SGN-E371616
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178682Clone name: TUS-29-M16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178682 is on microarray TOM1 spot ID 1-1-1.1.4.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72363 [cLER-1-P12] Trace: SGN-T92210 EST: SGN-E280656 Direction: 5' Facility: TIGR
Clone: SGN-C178682 [TUS-29-M16] Trace: SGN-T1506 EST: SGN-E378766 Direction: 5' Facility: Giov. Lab
Clone: SGN-C178682 [TUS-29-M16] Trace: SGN-T183946 EST: SGN-E371617 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371616Length: 407 bp (889 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371616 [] (trimmed) CACATTAATTAAAACCATAGCATAATAAGTACAAGAAATGATTAAATAGACAAAACACTTGCCCTTCTAAGTTGCATTGCGGCAAATTCTAGCAG
TAGGATTTGAGACACAAACTTGAAAGTACTTCTTCTTGGCCTCCGGTGAGCCGCGCTTCGGCTCATCGTCTGCCATGGCGGCCCCAGCCACAGAA
CATGCGGCAGCGGCCGCCATGGCAAAGAACAACTCCCTACGACCACCGTTGTTGTTGTTGATCTCCTTCTTGTTGCTCATTACAACATTTTCTCC
CTCAGACACGTGAGAACTTGCTTTCACCATAACAACCCTAGCACCACGGGTCGCGGCCGGGGCTTTGGTCAGGGCCGCGATCGAACCGCCGGCCA
AGGAGGTTGTCATTGTCATGGAAGCCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371616] SGN-U577606 Tomato 200607 Build 2 158 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183945 [Download][View] Facility Assigned ID: FA0AAD17BG08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0004 Quality Trim Threshold: 12.5